dbCAN Logo

PROTEIN: HRGMv2_4189_29_2

Loading protein structure...

Protein File & Metadata
Download PDB File
Source:
HRGMv2_4189_29_2.pdb
Genome ID:
HRGMv2_4189
Protein ID:
HRGMv2_4189_29_2

Loading protein structure information...

Detailed structural information will appear here after analysis...

Protein Sequence 
MSSSVLNVDS   SKTDEELESI   LSNNSYRYIH   FSLDESSNAS   NNIIQASFHD   QHLKNKLITL 60
TNAGFMPYVH   RGNTSSLVHH   SEIKNLWVPV   RNGEFSIDKN   GMVYTLERAV   DLRNEKLLVI 120
FSQIPLEPYS   ASLYRFFANN   FSTINKYIGD   NISILRIADI   GGVTGAFYLN   TKALPENEQN 180
VQELIANVAR   ACNIEHADIV   LYGTSKGGTA   SLYHGLKCNY   KVISVDPILD   DTHYISNLND 240
FHLIDGVFPQ   SKRELFIDLI   GNYKCGFGNN   NIILILSENS   EQFSYINNVI   GPIEKYLTVL 300
NNVNDKIKKH   PDVGPFSIHA   IVSLINISLF   GFTLEKKSID   FI 342
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-Q2FUY3-F1-model_v4 93 332 5 253 0.6395 0.7875
AF-A0A132Z3U1-F1-model_v4 93 332 5 262 0.638 0.7993
AF-A0A0H3GST9-F1-model_v4 84 334 1 277 0.6023 0.7444
AF-A0A0K0DTK1-F1-model_v4 84 332 2 278 0.6009 0.7493
AF-B0BNE5-F1-model_v4 84 333 2 281 0.5959 0.7455
AF-Q567K2-F1-model_v4 84 333 2 281 0.5956 0.7454
AF-P10768-F1-model_v4 84 333 2 281 0.595 0.7449
AF-Q54RL8-F1-model_v4 89 334 7 285 0.5926 0.7563
AF-I1LA40-F1-model_v4 82 333 1 283 0.5909 0.7371
AF-Q5F908-F1-model_v4 84 332 1 274 0.5903 0.7341
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
AF-A0A2L0UGW9-F1-model_v4 GT4 1 342 645 995 0.6424 0.9606
K0DBX3 GT101 1 337 271 592 0.6405 0.9212
AF-A0A7I7SNB1-F1-model_v4 CE1 93 333 33 295 0.5823 0.7693
AF-L0J8T0-F1-model_v4 CE1 93 333 32 295 0.5822 0.7694
AF-A0A7I7T5C8-F1-model_v4 CE1 93 333 33 295 0.5812 0.7679
AF-A0A6N4WCP7-F1-model_v4 CE1 93 333 34 296 0.5801 0.768
AF-K0ESI3-F1-model_v4 CE1 93 333 27 303 0.5746 0.7712
AF-A0A2U9Q165-F1-model_v4 CE1 93 333 38 300 0.5745 0.7654
AF-A0A1P8YMX7-F1-model_v4 CE1 93 333 26 303 0.5742 0.7695
AF-A0A1P8Y9A3-F1-model_v4 CE1 93 333 23 303 0.5689 0.7624
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A2L0UGW9 GT4 1 342 645 995 0.6424 0.9606
K0DBX3 GT101 1 337 271 592 0.6405 0.9212
QKT08862.1 CE1 47 336 19 323 0.5665 0.6775
A0A0D5AIR6 CE1 93 333 38 318 0.5606 0.7688
A0A069J7X9 CE1 37 331 5 375 0.5515 0.6756
D5UQK0 CE1 48 332 25 327 0.5511 0.658
A0A1X7LJD1 CE1 84 333 54 345 0.5434 0.7446
A0A088QH63 CE1 89 333 52 346 0.5376 0.7526
A0A364VCJ2 CE1 84 332 59 351 0.5229 0.7491
A0A6G9Y4S9 CE1 93 333 98 374 0.5224 0.7686
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
2uz0-assembly1.cif.gz_C 93 332 9 247 0.6419 0.787
6vhd-assembly1.cif.gz_B 93 332 7 255 0.634 0.7842
2uz0-assembly1.cif.gz_D 93 332 9 239 0.6278 0.7878
4rot-assembly1.cif.gz_A 93 332 12 261 0.6207 0.7864
5vol-assembly2.cif.gz_H 93 332 6 257 0.6133 0.7617
7wwh-assembly2.cif.gz_B 93 330 2 251 0.6005 0.7448
7l50-assembly1.cif.gz_A 82 330 6 285 0.5973 0.7551
3fcx-assembly2.cif.gz_B 84 333 1 275 0.5963 0.7382
3s8y-assembly1.cif.gz_A 84 333 1 277 0.5958 0.739
3ls2-assembly2.cif.gz_D 84 333 1 278 0.5953 0.7411
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-P23553-F1-model_v4 93 333 4 266 0.6251 0.7867
AF-Q8FFU3-F1-model_v4 84 333 1 277 0.6017 0.7485
AF-Q0TFT6-F1-model_v4 84 333 1 277 0.6016 0.748
AF-Q6BSS8-F1-model_v4 98 331 1 232 0.6006 0.7302
AF-B1IYB5-F1-model_v4 84 333 1 277 0.6001 0.7468
AF-Q31YW2-F1-model_v4 84 333 1 277 0.5994 0.7454
AF-Q1R9R8-F1-model_v4 84 333 1 277 0.5993 0.7451
AF-A1AD14-F1-model_v4 84 333 1 277 0.5993 0.745
AF-B0BNE5-F1-model_v4 84 333 2 281 0.5959 0.7455
AF-Q08E20-F1-model_v4 84 333 2 281 0.5958 0.745
Download Full SwissProt Results