PROTEIN: HRGMv2_4189_29_3
Loading protein structure...
Loading protein structure...
Protein File & Metadata
Source:
HRGMv2_4189_29_3.pdb
Genome ID:
Protein ID:
HRGMv2_4189_29_3
Loading protein structure information...
Detailed structural information will appear here after analysis...
Protein Sequence
MISSRLMMVK RVLLFLVLLL SMASMASDKI NDGHLAIYMK LPLLFNDYNG LLKLTRGDYI 60 YPGSFTMDDE NNVYIQYILE PKQNDNIIVS YDKHGKYLGY HKIASGGKGG AGEGIAVIKN 120 ESGKKIVYVI SNNGMLQSYL LSDQPFGGNL PRKSSVFLNG YNQFSFYNGN FIIESYDGPR 180 TVKNSRNNLV IYSKDLDVIR RITLPTEYSG YIVKYSNSTA SRFNKRQGIA LSAHFFVASY 240 GAYYSHEMSE TPDTFQGVRV FSLSGRMLYE DIIKPKLFMS YLINNNLSVS RVENEGVFVD 300 DEYIYQMYVY SDRYHQATSR KEGIVILKSA IPLLIN 336
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A175VX91-F1-model_v4 | 30 | 336 | 29 | 310 | 0.6748 |
0.784 |
| AF-Q2FX68-F1-model_v4 | 31 | 332 | 146 | 424 | 0.5057 |
0.7922 |
| AF-I1L080-F1-model_v4 | 18 | 334 | 103 | 439 | 0.4506 |
0.563 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A2R3IQF3-F1-model_v4 | GH33 | 42 | 336 | 1 | 319 | 0.5785 |
0.662 |
| AF-G0IUV1-F1-model_v4 | GH33 | 2 | 334 | 21 | 387 | 0.5442 |
0.6124 |
| AF-A0A4P6KXK1-F1-model_v4 | GH33 | 33 | 333 | 55 | 384 | 0.5249 |
0.6406 |
| AF-A0A2L1CJZ8-F1-model_v4 | GH33 | 31 | 335 | 48 | 370 | 0.5249 |
0.622 |
| ULL14878.1 | GH33 | 32 | 334 | 37 | 396 | 0.5117 |
0.6252 |
| AF-A0A6G9Q7L5-F1-model_v4 | CBM50 | 27 | 336 | 44 | 306 | 0.4932 |
0.8281 |
| AF-A0A6G9Q5Q6-F1-model_v4 | CBM50 | 30 | 336 | 48 | 301 | 0.4899 |
0.8471 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A173ZI87 | GH117 | 24 | 332 | 27 | 358 | 0.5892 |
0.6795 |
| A0A1H1EXA3 | GH183 | 27 | 334 | 5 | 330 | 0.577 |
0.6457 |
| G0IUV1 | GH33 | 2 | 334 | 21 | 387 | 0.5442 |
0.6124 |
| H8K2G9 | GH33 | 31 | 333 | 1 | 364 | 0.5428 |
0.642 |
| A0A5P2G5Y6 | GH33 | 31 | 330 | 22 | 348 | 0.5391 |
0.6321 |
| A0A416HB49 | GH33 | 36 | 329 | 1 | 347 | 0.539 |
0.6413 |
| A0A857MN91 | GH183 | 16 | 332 | 23 | 365 | 0.5386 |
0.616 |
| A0A7Z1X299 | GH33 | 31 | 333 | 26 | 351 | 0.5377 |
0.6274 |
| X5DCH1 | GH33 | 31 | 333 | 23 | 345 | 0.535 |
0.6191 |
| A0A979H1M7 | GH33 | 1 | 332 | 1 | 370 | 0.5344 |
0.5894 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 6v8i-assembly1.cif.gz_AI | 19 | 332 | 19 | 422 | 0.5108 |
0.7152 |
| 5efv-assembly1.cif.gz_B | 31 | 332 | 145 | 423 | 0.5033 |
0.7876 |
| 5efv-assembly1.cif.gz_C | 31 | 332 | 144 | 418 | 0.4974 |
0.7859 |
| 5efv-assembly1.cif.gz_A | 31 | 332 | 148 | 419 | 0.4968 |
0.7942 |
| 7seu-assembly1.cif.gz_A | 36 | 329 | 1 | 322 | 0.4961 |
0.5744 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P27622-F1-model_v4 | 31 | 333 | 10 | 291 | 0.5818 |
0.7884 |