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Cluster: HRGMv2_4062_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4062_27 HRGMv2_4062_27_8 6820 8574 - GH2
NULL(UNKNOWN) HRGMv2_4062_27 HRGMv2_4062_27_9 8588 12712 - NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_4062_27 HRGMv2_4062_27_10 12723 14870 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_4062_27 HRGMv2_4062_27_11 14896 15816 - 3.A.1.1.32
TC HRGMv2_4062_27 HRGMv2_4062_27_12 15820 16788 - 3.A.1.1.4
pfam HRGMv2_4062_27 HRGMv2_4062_27_13 16800 18728 - SBP_bac_1 | SBP_bac_8
NULL(UNKNOWN) HRGMv2_4062_27 HRGMv2_4062_27_14 19009 19983 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_4062_27 HRGMv2_4062_27_15 20048 21352 - GH109
Gene ID: HRGMv2_4062_27_8
Type: CAZyme
Location: 6820 - 8574 (-)
Gene ID: HRGMv2_4062_27_9
Type:
Location: 8588 - 12712 (-)
Gene ID: HRGMv2_4062_27_10
Type:
Location: 12723 - 14870 (-)
Gene ID: HRGMv2_4062_27_11
Type: TC
Location: 14896 - 15816 (-)
Gene ID: HRGMv2_4062_27_12
Type: TC
Location: 15820 - 16788 (-)
Gene ID: HRGMv2_4062_27_13
Type: pfam
Location: 16800 - 18728 (-)
Gene ID: HRGMv2_4062_27_14
Type:
Location: 19009 - 19983 (-)
Gene ID: HRGMv2_4062_27_15
Type: CAZyme
Location: 20048 - 21352 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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