PROTEIN: HRGMv2_4062_27_14
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Protein File & Metadata
Source:
HRGMv2_4062_27_14.pdb
Genome ID:
Protein ID:
HRGMv2_4062_27_14
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Protein Sequence
MLQACRFVLR KSETKKMFKY YLMVITATLL YSFQFIFSKS YQRRKGSSLF YSMIFSAISC 60 LATIPFLFVL NKGKVEFTWF SFAIALLYAI DVIICSVFGA KILSKANLSV YSLFLMLGGM 120 ILPFLYGLII GENFTALKAV SIVSVAVAMI FSLKKDEEKK LDGFTIFCFI VIFVTNGMTG 180 VLTYMHQRST QAIVSAGGFL ILYNLCRFIL STAILFGIFV YGKNKNREVL LIRGADDTRK 240 ATTAKSEWMI AVAASVGYAV MNETAVLFTT ITAKYIDAGI QSTIITGGVM LLSAFSGLIF 300 GEKPTKNTFF AVFFAVLGTV LIML 324
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q9HXB6-F1-model_v4 | 19 | 324 | 1 | 286 | 0.7859 |
0.8726 |
| AF-Q9I5Z7-F1-model_v4 | 18 | 324 | 1 | 276 | 0.7832 |
0.8657 |
| AF-Q8ZK79-F1-model_v4 | 8 | 324 | 4 | 306 | 0.7804 |
0.8344 |
| AF-K0F3J5-F1-model_v4 | 5 | 324 | 1 | 290 | 0.777 |
0.8498 |
| AF-Q2G1P2-F1-model_v4 | 13 | 324 | 1 | 286 | 0.7752 |
0.8513 |
| AF-A0A0H3GK88-F1-model_v4 | 10 | 324 | 1 | 288 | 0.768 |
0.8425 |
| AF-Q9HY21-F1-model_v4 | 3 | 324 | 3 | 297 | 0.7642 |
0.8389 |
| AF-I1NF67-F1-model_v4 | 7 | 324 | 1 | 323 | 0.7637 |
0.8197 |
| AF-I1LF77-F1-model_v4 | 7 | 324 | 1 | 323 | 0.7588 |
0.816 |
| AF-A0A0N4U1S1-F1-model_v4 | 13 | 324 | 1 | 287 | 0.7588 |
0.8311 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A3P6AF83-F1-model_v4 | GH28 | 1 | 324 | 344 | 766 | 0.5747 |
0.8207 |
| WJH36882.1 | GH36 | 1 | 324 | 334 | 665 | 0.5691 |
0.7808 |
| AF-A0A4D6KI88-F1-model_v4 | GH1 | 8 | 324 | 87 | 392 | 0.5127 |
0.8123 |
| AF-Q5B3N6-F1-model_v4 | GT25 | 1 | 324 | 60 | 798 | 0.4855 |
0.6975 |
| AF-A0A7H8KSK8-F1-model_v4 | GT51 | 6 | 324 | 807 | 1109 | 0.4716 |
0.7822 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A3P6AF83 | GH28 | 1 | 324 | 344 | 766 | 0.5747 |
0.8207 |
| WJH36882.1 | GH36 | 1 | 324 | 334 | 665 | 0.5691 |
0.7808 |
| A0A4D6KI88 | GH1 | 8 | 324 | 87 | 392 | 0.5127 |
0.8123 |
| Q5B3N6 | GT25 | 1 | 324 | 60 | 798 | 0.4855 |
0.6975 |
| A0A7H8KSK8 | GT51 | 6 | 324 | 807 | 1109 | 0.4716 |
0.7822 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 7b0k-assembly1.cif.gz_A | 20 | 324 | 1 | 255 | 0.7694 |
0.88 |
| 7paf-assembly1.cif.gz_D | 20 | 323 | 1 | 278 | 0.7663 |
0.8447 |
| 5y79-assembly1.cif.gz_B | 11 | 324 | 1 | 303 | 0.7536 |
0.8098 |
| 5i20-assembly4.cif.gz_D | 16 | 324 | 1 | 279 | 0.7462 |
0.8264 |
| 5i20-assembly3.cif.gz_C | 16 | 324 | 1 | 279 | 0.738 |
0.8188 |
| 5i20-assembly2.cif.gz_B | 16 | 324 | 1 | 277 | 0.7363 |
0.8184 |
| 5i20-assembly1.cif.gz_A | 16 | 324 | 1 | 281 | 0.7353 |
0.8181 |
| 5i20-assembly5.cif.gz_E | 16 | 324 | 1 | 283 | 0.7272 |
0.809 |
| 5oge-assembly3.cif.gz_H-2 | 15 | 324 | 1 | 290 | 0.7042 |
0.7821 |
| 5oge-assembly2.cif.gz_B | 15 | 324 | 1 | 290 | 0.7041 |
0.7821 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P72732-F1-model_v4 | 10 | 324 | 1 | 316 | 0.7937 |
0.8395 |
| AF-Q1RKL2-F1-model_v4 | 10 | 324 | 1 | 282 | 0.7858 |
0.8718 |
| AF-Q9ZE70-F1-model_v4 | 10 | 324 | 1 | 282 | 0.7842 |
0.8742 |
| AF-Q44601-F1-model_v4 | 14 | 324 | 1 | 288 | 0.7837 |
0.8694 |
| AF-O34416-F1-model_v4 | 17 | 324 | 1 | 285 | 0.7812 |
0.8595 |
| AF-O28739-F1-model_v4 | 18 | 324 | 1 | 274 | 0.7802 |
0.8707 |
| AF-A4IFK2-F1-model_v4 | 6 | 324 | 1 | 300 | 0.7717 |
0.84 |
| AF-Q9X4M3-F1-model_v4 | 14 | 324 | 1 | 293 | 0.769 |
0.8298 |
| AF-Q82ZT8-F1-model_v4 | 14 | 324 | 1 | 295 | 0.7657 |
0.8236 |
| AF-O32256-F1-model_v4 | 13 | 324 | 2 | 287 | 0.7638 |
0.8575 |