PROTEIN: HRGMv2_4062_27_10
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Protein File & Metadata
Source:
HRGMv2_4062_27_10.pdb
Genome ID:
Protein ID:
HRGMv2_4062_27_10
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Protein Sequence
MKKRILITAL ACGLMFSFSG CGKVKVEGFE LSHYDGSDFS NGYDSDLLYK NTSEFLGGDS 60 GVIWVSEEED PEYGGYFYQY MSECASVNNG GTPSDIHGDI ATDSSTAAYT THIAISRSKD 120 MYDWKLCGAL NNGYGLKAGM KAFTEGGIWA PETIRDPKTG KYFMYFGGRS SAYYRENYEK 180 NYGSEPVLGV NNQVWVAGIA VSDTPVGPFE LVTSENYYGG KANLNGEYLT EEAPAFDFVK 240 WYGADCAFNR YCTDLAPFFD ENGDLYVVFN AQESSIDCWG IKMKDMVTPD YSTITLLMTA 300 GGGRSPYAGD DGEADSSKPW RDGKIAAPVR VEYKGKAANN SAITPVIGED TAHYGINTNY 360 INDPQAPRYK KSSYIEWEEW QDGTPNTEMI EVDGKTVANP AYNSNSDNSK VREGVQVINH 420 KDKNGRMAYY LTYTYTGVKN ALYNVHFAVA SSPLGNIKGE EYTAPKGKEF SMSLGVDVNN 480 DYMSNLGHVD YVEVDGEWWI AHWEWTVPFG SDPKYDIGRL YALSPMTWFD DPSADYYLPL 540 ANGPTQYLQA KPCVATGYKN IAGEASVKAT NVQGDTLKYL TDGYTVTKSM YSDCVLQVKN 600 KTEITLTFDS PKTVRGILIY NSYNYETAFS KIAAIQFELA ERPEWYTGGG KGLSCYIKDL 660 GFPKAYKENE KILYSGVPSA ATFSEIKVNS ITITISDHLG NANTLNIAEI MVLGK 715
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A7M2RE82-F1-model_v4 | GH43 | 29 | 715 | 116 | 734 | 0.6398 |
0.7542 |
| AF-A0A0C5VS69-F1-model_v4 | CBM13 , GH43_26 | 46 | 715 | 31 | 489 | 0.5643 |
0.7161 |
| AF-Q09B79-F1-model_v4 | CBM42 , GH43_26 | 46 | 714 | 33 | 475 | 0.5619 |
0.7252 |
| AF-A0A250J8A5-F1-model_v4 | CBM42 , GH43_26 | 46 | 714 | 32 | 474 | 0.5617 |
0.7238 |
| AF-A0A5P9PGE9-F1-model_v4 | GH43_33 | 27 | 685 | 20 | 533 | 0.5216 |
0.6293 |
| K3VWI1 | GH43_33 | 23 | 684 | 13 | 579 | 0.5078 |
0.5818 |
| AF-A0A7S8DGR8-F1-model_v4 | GH43_33 | 26 | 684 | 16 | 579 | 0.5066 |
0.5831 |
| AF-W9K1C5-F1-model_v4 | GH43_33 | 27 | 684 | 10 | 573 | 0.5044 |
0.5779 |
| AF-Q3ZM12-F1-model_v4 | GH43_33 | 33 | 684 | 11 | 569 | 0.5031 |
0.5789 |
| AF-I1RG38-F1-model_v4 | GH43_33 | 33 | 684 | 21 | 579 | 0.4982 |
0.577 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A7I8DRC4 | GH43_33 | 23 | 715 | 1 | 465 | 0.7262 |
0.8861 |
| A0A416HDJ9 | GH43_33 | 29 | 715 | 5 | 464 | 0.717 |
0.8941 |
| A0A2S0KPY7 | GH43_33 | 27 | 715 | 3 | 489 | 0.7069 |
0.8503 |
| F3ZWG9 | GH43_33 | 25 | 715 | 29 | 517 | 0.6918 |
0.8559 |
| A0A7M2RE82 | GH43 | 29 | 715 | 116 | 734 | 0.6398 |
0.7542 |
| UKT65030.1 | CBM13 , GH43_34 | 35 | 695 | 54 | 495 | 0.5418 |
0.7162 |
| K3VWI1 | GH43_33 | 23 | 684 | 13 | 579 | 0.5078 |
0.5818 |
| A0A2A9JFV9 | GH43_33 | 44 | 687 | 31 | 682 | 0.4594 |
0.5081 |
| A0A7U4KL54 | CBM13 , CBM35 , GH43_26 | 38 | 686 | 20 | 1244 | 0.3238 |
0.5092 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 3akh-assembly1.cif.gz_A | 48 | 714 | 1 | 447 | 0.5785 |
0.7184 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q82P90-F1-model_v4 | 47 | 713 | 35 | 481 | 0.5592 |
0.7199 |