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Cluster: HRGMv2_4055_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4055_24 HRGMv2_4055_24_2 2868 5153 - GH94
NULL(UNKNOWN) HRGMv2_4055_24 HRGMv2_4055_24_3 5162 6220 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_4055_24 HRGMv2_4055_24_4 6232 8310 - GH36
TF HRGMv2_4055_24 HRGMv2_4055_24_5 8407 9309 + HTH_AraC | HTH_AraC
CAZyme HRGMv2_4055_24 HRGMv2_4055_24_6 9293 11278 - GH42
NULL(UNKNOWN) HRGMv2_4055_24 HRGMv2_4055_24_7 11364 14789 - NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_4055_24 HRGMv2_4055_24_8 14806 16503 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_4055_24 HRGMv2_4055_24_9 16528 17502 - 3.A.1.1.10
TC HRGMv2_4055_24 HRGMv2_4055_24_10 17519 18502 - 3.A.1.1.10
Gene ID: HRGMv2_4055_24_2
Type: CAZyme
Location: 2868 - 5153 (-)
Gene ID: HRGMv2_4055_24_3
Type:
Location: 5162 - 6220 (-)
Gene ID: HRGMv2_4055_24_4
Type: CAZyme
Location: 6232 - 8310 (-)
Gene ID: HRGMv2_4055_24_5
Type: TF
Location: 8407 - 9309 (+)
Gene ID: HRGMv2_4055_24_6
Type: CAZyme
Location: 9293 - 11278 (-)
Gene ID: HRGMv2_4055_24_7
Type:
Location: 11364 - 14789 (-)
Gene ID: HRGMv2_4055_24_8
Type:
Location: 14806 - 16503 (-)
Gene ID: HRGMv2_4055_24_9
Type: TC
Location: 16528 - 17502 (-)
Gene ID: HRGMv2_4055_24_10
Type: TC
Location: 17519 - 18502 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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