PROTEIN: HRGMv2_4055_24_3
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Protein File & Metadata
Source:
HRGMv2_4055_24_3.pdb
Genome ID:
Protein ID:
HRGMv2_4055_24_3
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Protein Sequence
MKYIDHYDKV LEKYNEAWHL ENHDRPVMNV TSWEQKTPVL KEPDSVEARW LDTDFVARKA 60 RYIVENQHYS GESFPTVFTN LGPDLFAALY GAELKFGEST SWSEHCISEW KEGMRLTPDR 120 NGKWYKKIIE LTEAMVEESK GDYVVGITDI HPGMDALVAM RGPQELCMDL YDCPELIKPL 180 PMQLFEGFKQ LYDDLYRIVT RYTKGTTTWM KILSDDKSYV TSCDLICMIS QDNFDEFVRE 240 ELIAETKWLD KNIFHLDGPG ALRHLDALLE IPTINGIQWV PGAGAPPVGD WPEVLQKVQR 300 AGKMLQLHVD NANELKTLSE VVKPEGVIID CYAANAEQAD ELVRYAEKLW KK 352
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P95458-F1-model_v4 | 1 | 352 | 1 | 355 | 0.7067 |
0.7353 |
| AF-O25325-F1-model_v4 | 11 | 351 | 1 | 339 | 0.7023 |
0.7395 |
| AF-Q5A5N0-F1-model_v4 | 5 | 350 | 5 | 361 | 0.7017 |
0.7462 |
| AF-Q9PN54-F1-model_v4 | 11 | 351 | 1 | 340 | 0.6998 |
0.7366 |
| AF-P32362-F1-model_v4 | 5 | 352 | 9 | 364 | 0.6978 |
0.7404 |
| AF-P06132-F1-model_v4 | 1 | 352 | 5 | 367 | 0.6977 |
0.7355 |
| AF-G4VSS2-F1-model_v4 | 6 | 352 | 6 | 364 | 0.6967 |
0.7408 |
| AF-Q9PTS2-F1-model_v4 | 6 | 352 | 14 | 369 | 0.6962 |
0.7444 |
| AF-P70697-F1-model_v4 | 6 | 352 | 12 | 367 | 0.6958 |
0.7428 |
| AF-A0A1C1CI81-F1-model_v4 | 5 | 348 | 6 | 363 | 0.6957 |
0.7454 |
Structural Homologs - CAZyme3D-Whole
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs - CAZyme-ID50
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 4ay8-assembly2.cif.gz_B | 6 | 348 | 3 | 340 | 0.721 |
0.7616 |
| 3cyv-assembly1.cif.gz_A-2 | 1 | 352 | 1 | 352 | 0.7116 |
0.7363 |
| 4zr8-assembly1.cif.gz_A | 1 | 351 | 1 | 353 | 0.7072 |
0.7353 |
| 4zr8-assembly1.cif.gz_B | 7 | 352 | 1 | 354 | 0.7064 |
0.7449 |
| 2q6z-assembly1.cif.gz_A | 1 | 351 | 1 | 356 | 0.7047 |
0.7351 |
| 1r3s-assembly1.cif.gz_A | 1 | 351 | 1 | 356 | 0.7047 |
0.735 |
| 3gw0-assembly1.cif.gz_A-2 | 1 | 351 | 1 | 356 | 0.704 |
0.7345 |
| 3gw3-assembly1.cif.gz_A-2 | 5 | 351 | 3 | 357 | 0.7032 |
0.7416 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-B5YK82-F1-model_v4 | 7 | 352 | 1 | 338 | 0.7185 |
0.7565 |
| AF-A7NKU6-F1-model_v4 | 8 | 352 | 1 | 352 | 0.713 |
0.7514 |
| AF-Q1D1F0-F1-model_v4 | 7 | 352 | 1 | 344 | 0.7119 |
0.7485 |
| AF-Q11X05-F1-model_v4 | 1 | 351 | 1 | 344 | 0.7097 |
0.7433 |
| AF-A5UU35-F1-model_v4 | 7 | 351 | 1 | 348 | 0.7075 |
0.7418 |
| AF-Q7U645-F1-model_v4 | 5 | 352 | 1 | 351 | 0.7069 |
0.7402 |
| AF-A2CAR8-F1-model_v4 | 6 | 352 | 1 | 351 | 0.7056 |
0.7405 |
| AF-A7H9E0-F1-model_v4 | 8 | 351 | 1 | 346 | 0.7048 |
0.7386 |
| AF-A9BAY8-F1-model_v4 | 6 | 352 | 1 | 351 | 0.703 |
0.7373 |
| AF-B7I451-F1-model_v4 | 1 | 352 | 1 | 357 | 0.7023 |
0.7325 |