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PROTEIN: HRGMv2_4055_24_8

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Protein File & Metadata
Download PDB File
Source:
HRGMv2_4055_24_8.pdb
Genome ID:
HRGMv2_4055
Protein ID:
HRGMv2_4055_24_8

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Detailed structural information will appear here after analysis...

Protein Sequence 
MKKIARILVV   LLSVLMLFGT   VACGTGGKEV   DPVNRDKELD   LSLFHWSMTG   FANAYKESNV 60
TKQLMEKLKI   SDFEVYTAPY   SDWQTSFGLL   ASTGELPDFF   KFNGPDNLEQ   YNDWIEDEML 120
MCIDDWVTED   KYPNLYEHLQ   RYKHLNLGSI   SPDGKLYAIP   VLSGQPNHVM   VIRGNWIDNL 180
NKKKDKIANI   KYIKGSDYTL   GNEEYTYPET   ISDFYRLAVA   MTYADPDGNG   KDDTYGYTSS 240
DTTMWYNHWI   FNAFGSSYQD   YMLNEETGKY   ESTWITNGSK   NAVKFIKKMR   DEGIIEPNFF 300
ANGPIDGMTQ   FFQGKIGMTL   INGDWYNGEY   AKMKDSFRDD   IEAGLVDPDR   LMDMVVPLPA 360
GDGSFGSVEG   ARGFKGNYGY   AWFTGINNDI   SDNKKDRILM   LLDYLLSDEG   YKLTLYGVEG 420
EHYEEDENGN   IVNLIPNDDN   GDPRTLKGYD   YAWEIRQMID   QSTQYFMPWE   DNYEKLDAMI 480
EYVNSEEGGK   IYAPPGVAGE   TRTKYEKALF   DQALEWYAKM   IYGQNLDGGA   MTDFDATWED 540
FVGRYLDNKG   REILNEINEI   IASRG 565
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-A0A133CZN8-F1-model_v4 16 565 21 502 0.7344 0.8246
AF-A0A133D019-F1-model_v4 7 565 15 484 0.6956 0.7867
AF-A0A133CDW9-F1-model_v4 1 557 7 444 0.6533 0.754
AF-A0A133CPC5-F1-model_v4 33 553 30 423 0.6511 0.8067
AF-A0A0H3GHK7-F1-model_v4 36 564 21 435 0.6463 0.7744
AF-Q8DNU8-F1-model_v4 1 557 2 440 0.6454 0.7426
AF-P76042-F1-model_v4 34 556 24 430 0.6449 0.7834
AF-K0F8J3-F1-model_v4 37 556 29 435 0.6446 0.7866
AF-K0F002-F1-model_v4 28 556 40 439 0.6439 0.8017
AF-O53485-F1-model_v4 38 557 35 439 0.6432 0.7911
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A0M1Q963 GH43_11 24 565 32 505 0.7828 0.8915
AF-A0A7U1BNH7-F1-model_v4 GH10 36 563 28 745 0.5102 0.625
A0A9Q8PNJ5 GH4 1 556 171 866 0.5006 0.62
UJP10085.1 GH154 7 532 405 1163 0.3766 0.5746
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A0M1Q963 GH43_11 24 565 32 505 0.7828 0.8915
A0A7U1BNH7 GH10 36 563 28 745 0.5102 0.625
A0A9Q8PNJ5 GH4 1 556 171 866 0.5006 0.62
UJP10085.1 GH154 7 532 405 1163 0.3766 0.5746
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
5xs8-assembly1.cif.gz_A 38 564 1 474 0.7382 0.8196
5h6u-assembly1.cif.gz_A 34 565 3 487 0.7368 0.8124
3vlw-assembly2.cif.gz_B 33 565 4 489 0.7362 0.8119
4tqu-assembly1.cif.gz_Q 34 565 6 490 0.735 0.814
6jhx-assembly2.cif.gz_B 34 564 6 483 0.7279 0.8098
6fth-assembly1.cif.gz_A 36 565 2 496 0.7138 0.7802
3omb-assembly1.cif.gz_A 31 565 1 503 0.7023 0.7622
5g62-assembly2.cif.gz_B 38 565 1 489 0.7023 0.7706
5g5y-assembly1.cif.gz_A 35 565 1 491 0.6904 0.7614
7c6r-assembly1.cif.gz_A 39 556 1 414 0.6778 0.7964
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-P37966-F1-model_v4 31 565 30 502 0.7705 0.8761
AF-Q795R2-F1-model_v4 29 565 30 498 0.7084 0.8126
AF-A0A0H2URD6-F1-model_v4 19 565 24 535 0.6874 0.7578
AF-Q8FVS7-F1-model_v4 36 556 23 411 0.6711 0.8291
AF-Q578M8-F1-model_v4 36 556 23 411 0.6704 0.8282
AF-Q2YKZ9-F1-model_v4 36 556 23 411 0.6692 0.8268
AF-Q7LYW7-F1-model_v4 34 557 39 450 0.649 0.7967
AF-O32156-F1-model_v4 22 557 16 422 0.6486 0.7811
AF-Q9RUE8-F1-model_v4 35 557 18 420 0.6471 0.7845
AF-P76042-F1-model_v4 34 556 24 430 0.6449 0.7834
Download Full SwissProt Results