dbCAN Logo

Cluster: HRGMv2_4047_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4047_1 HRGMv2_4047_1_186 216136 217971 + GH20
NULL(UNKNOWN) HRGMv2_4047_1 HRGMv2_4047_1_187 218223 219155 + NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_4047_1 HRGMv2_4047_1_188 219287 221215 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_4047_1 HRGMv2_4047_1_189 221234 224326 + GH106
CAZyme HRGMv2_4047_1 HRGMv2_4047_1_190 224316 226841 + GH116
pfam HRGMv2_4047_1 HRGMv2_4047_1_191 226899 228311 - PK | PK_C
pfam HRGMv2_4047_1 HRGMv2_4047_1_192 228680 230074 + Lyase_1 | FumaraseC_C
TC HRGMv2_4047_1 HRGMv2_4047_1_193 230077 230859 + 3.D.10.1.4
Gene ID: HRGMv2_4047_1_186
Type: CAZyme
Location: 216136 - 217971 (+)
Gene ID: HRGMv2_4047_1_187
Type:
Location: 218223 - 219155 (+)
Gene ID: HRGMv2_4047_1_188
Type:
Location: 219287 - 221215 (+)
Gene ID: HRGMv2_4047_1_189
Type: CAZyme
Location: 221234 - 224326 (+)
Gene ID: HRGMv2_4047_1_190
Type: CAZyme
Location: 224316 - 226841 (+)
Gene ID: HRGMv2_4047_1_191
Type: pfam
Location: 226899 - 228311 (-)
Gene ID: HRGMv2_4047_1_192
Type: pfam
Location: 228680 - 230074 (+)
Gene ID: HRGMv2_4047_1_193
Type: TC
Location: 230077 - 230859 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List