PROTEIN: HRGMv2_4047_1_187
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Protein File & Metadata
Source:
HRGMv2_4047_1_187.pdb
Genome ID:
Protein ID:
HRGMv2_4047_1_187
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Protein Sequence
MQYFLIVLST LFVAGQFTFN KMYQKYVVKS TAALLLFPVL TGIIAVALFL SLNGFSLAFG 60 AFSFGIAVGE AIVLTLCMLC GIFVVKFGRV SVYTVFMMLG GMLLPFIYGL IFLGEPLSVF 120 KIIGILVLVA GLILSALPDK NSAGEKPKPV FYLLCFAVFC LNGGVSILSK VHQINADAIG 180 TMDFMVWLYL MQLAISALCF GVYMLFFRKK NAFPASENLS EKEERRRAFQ KSALWAFLIS 240 LGYMLFSGFG YLLQLNAAKE IEASLLYPIV TGGSILFSTL AAWAVFKEKI NLPLWISLAL 300 TFIGTVLFMF 310
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q8DPI5-F1-model_v4 | 1 | 310 | 9 | 295 | 0.8274 |
0.8894 |
| AF-Q5F951-F1-model_v4 | 3 | 310 | 1 | 282 | 0.8225 |
0.8918 |
| AF-P44170-F1-model_v4 | 3 | 310 | 1 | 286 | 0.8178 |
0.8765 |
| AF-A0A0H3GYZ7-F1-model_v4 | 1 | 310 | 1 | 276 | 0.8134 |
0.8834 |
| AF-K0F3J5-F1-model_v4 | 1 | 310 | 11 | 290 | 0.8083 |
0.8899 |
| AF-Q8ZL13-F1-model_v4 | 1 | 310 | 13 | 285 | 0.8047 |
0.8945 |
| AF-K0F565-F1-model_v4 | 1 | 310 | 1 | 287 | 0.8019 |
0.8533 |
| AF-Q328I8-F1-model_v4 | 1 | 310 | 2 | 310 | 0.8013 |
0.8427 |
| AF-A0A0H3GXI1-F1-model_v4 | 1 | 310 | 3 | 280 | 0.8009 |
0.8751 |
| AF-Q8ZK75-F1-model_v4 | 2 | 310 | 1 | 307 | 0.8004 |
0.8437 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| WJH36882.1 | GH36 | 1 | 310 | 375 | 664 | 0.5629 |
0.8315 |
| AF-A0A3P6AF83-F1-model_v4 | GH28 | 1 | 310 | 450 | 766 | 0.5366 |
0.7764 |
| AF-A0A7H8KSK8-F1-model_v4 | GT51 | 1 | 310 | 816 | 1109 | 0.5062 |
0.8383 |
| AF-A0A4D6KI88-F1-model_v4 | GH1 | 1 | 310 | 93 | 392 | 0.4667 |
0.7305 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| WJH36882.1 | GH36 | 1 | 310 | 375 | 664 | 0.5629 |
0.8315 |
| A0A3P6AF83 | GH28 | 1 | 310 | 450 | 766 | 0.5366 |
0.7764 |
| A0A7H8KSK8 | GT51 | 1 | 310 | 816 | 1109 | 0.5062 |
0.8383 |
| A0A4D6KI88 | GH1 | 1 | 310 | 93 | 392 | 0.4667 |
0.7305 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 7paf-assembly1.cif.gz_D | 2 | 309 | 1 | 278 | 0.8366 |
0.8975 |
| 5i20-assembly4.cif.gz_D | 1 | 310 | 1 | 278 | 0.8026 |
0.8707 |
| 7b0k-assembly1.cif.gz_A | 2 | 310 | 1 | 255 | 0.7848 |
0.8794 |
| 5i20-assembly1.cif.gz_A | 1 | 310 | 1 | 280 | 0.7848 |
0.8581 |
| 5i20-assembly5.cif.gz_E | 1 | 310 | 1 | 282 | 0.7836 |
0.8549 |
| 5i20-assembly3.cif.gz_C | 1 | 310 | 1 | 277 | 0.7831 |
0.8576 |
| 5i20-assembly2.cif.gz_B | 1 | 310 | 1 | 275 | 0.78 |
0.8557 |
| 5ogk-assembly1.cif.gz_B | 1 | 310 | 2 | 288 | 0.7792 |
0.8473 |
| 6qsk-assembly2.cif.gz_G-2 | 1 | 310 | 3 | 287 | 0.7754 |
0.8475 |
| 6qsk-assembly1.cif.gz_A | 1 | 310 | 2 | 283 | 0.7732 |
0.848 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P44170-F1-model_v4 | 3 | 310 | 1 | 286 | 0.8178 |
0.8765 |
| AF-O34416-F1-model_v4 | 1 | 310 | 3 | 285 | 0.8066 |
0.8736 |
| AF-Q08794-F1-model_v4 | 1 | 310 | 5 | 297 | 0.8014 |
0.8698 |
| AF-P39314-F1-model_v4 | 2 | 310 | 1 | 307 | 0.7987 |
0.8419 |
| AF-P14182-F1-model_v4 | 1 | 310 | 1 | 286 | 0.7971 |
0.8596 |
| AF-A6WUW2-F1-model_v4 | 6 | 310 | 1 | 276 | 0.7912 |
0.8693 |
| AF-O29740-F1-model_v4 | 1 | 310 | 1 | 285 | 0.7886 |
0.8503 |
| AF-P37511-F1-model_v4 | 1 | 310 | 2 | 293 | 0.7875 |
0.8506 |
| AF-Q4UNE6-F1-model_v4 | 1 | 310 | 6 | 282 | 0.7871 |
0.8758 |
| AF-P39649-F1-model_v4 | 1 | 310 | 2 | 283 | 0.7862 |
0.8656 |