PROTEIN: HRGMv2_4047_1_188
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Protein File & Metadata
Source:
HRGMv2_4047_1_188.pdb
Genome ID:
Protein ID:
HRGMv2_4047_1_188
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Protein Sequence
MIVQRLWPDD KYDGAFYDDF IERIAKHKGC CDEVWMCTLS GMPALSTHKA FAEKLSGYAE 60 KLRAAGIAVS LQVGRTIGHW ANENFSDYSG QPEDANFTVN LSGKTEEGFY CARSEGFRNY 120 FEQVCRIYCE TLHPQSIYFD DDLRLRAWDG NMRCACPNCL KAFNERYKTK YASAEELGKA 180 VKEDGETRKN FLAFSYGNLA EFTERISRAC AAGYPDVIVG LQHGGYSGEL NRHLFAAIKR 240 SGAKAIGSRS GAGAYTDDAP AELVKKANEL ECQLSRVPDF VTHRCPEIEG YPHVYFNKSA 300 HGFLMESVID LAQGFNFLSF AAFCGNYEKQ LFEEFNRKFS KNRSYLERLV AANNGTYRLG 360 IRNFIPERYF LTDDDYPSGA LTAGRYMCPQ FYYGLPVTYD MRGKGALYLD HRLVNILTGS 420 EIDMLLKNPV ITSGRAIIEL QKRGFGDKTG VRAEPINGGY YEEEIFGYGK NNVTFLCGDC 480 TVLYGDVKAI SRYAPHSEMG IVKPQFRGGG IASCITETAC GGKWLVLGYA PENTKPSLAK 540 AQSIADAVNE IAALPVKIGA SRLLQYPRGN EKGVSAVTFL NASVEKSAPT FVSVVSAAGK 600 RFIWQAQDED PVALPAVIKG GIASVTLPEL AGWTAGTLFT EE 642
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A0H3GP41-F1-model_v4 | 1 | 642 | 15 | 685 | 0.7191 |
0.7597 |
| AF-I1LRU3-F1-model_v4 | 1 | 609 | 14 | 496 | 0.5282 |
0.6198 |
| AF-Q42795-F1-model_v4 | 1 | 634 | 14 | 496 | 0.5274 |
0.6189 |
| AF-A0A1D6K353-F1-model_v4 | 1 | 642 | 89 | 525 | 0.5002 |
0.6667 |
| AF-O65258-F1-model_v4 | 1 | 618 | 96 | 540 | 0.4977 |
0.6554 |
| AF-A0A0R0GWB3-F1-model_v4 | 1 | 631 | 83 | 568 | 0.4939 |
0.6162 |
| AF-Q652P5-F1-model_v4 | 1 | 631 | 97 | 533 | 0.4932 |
0.655 |
| AF-I1K0Y6-F1-model_v4 | 1 | 610 | 86 | 519 | 0.4879 |
0.6604 |
| AF-A0A0B4KGE4-F1-model_v4 | 1 | 642 | 185 | 625 | 0.476 |
0.674 |
| AF-A0A1D6I096-F1-model_v4 | 1 | 631 | 243 | 679 | 0.4416 |
0.6561 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A9E8FIW7 | GH0 | 1 | 642 | 11 | 698 | 0.7697 |
0.8179 |
| D7AXC9 | GH0 | 1 | 642 | 27 | 699 | 0.7487 |
0.7987 |
| AF-A0A7G5GZU1-F1-model_v4 | GH0 | 1 | 642 | 45 | 725 | 0.739 |
0.7976 |
| AF-A0A515A243-F1-model_v4 | GH0 | 1 | 642 | 45 | 724 | 0.7385 |
0.7971 |
| AF-A0A6P1W369-F1-model_v4 | GH0 | 1 | 642 | 45 | 724 | 0.7383 |
0.7968 |
| AF-A0A6G9AWZ8-F1-model_v4 | GH0 | 1 | 642 | 45 | 724 | 0.738 |
0.7965 |
| AF-A0A7S7NKW0-F1-model_v4 | GH0 | 1 | 642 | 35 | 722 | 0.7362 |
0.7951 |
| AF-A0A7G8BS10-F1-model_v4 | GH0 | 1 | 642 | 40 | 729 | 0.7356 |
0.7972 |
| AF-A0A6C0GTH1-F1-model_v4 | GH0 | 1 | 642 | 47 | 739 | 0.7342 |
0.7991 |
| AF-A0A089M3D6-F1-model_v4 | GH42 | 1 | 641 | 5 | 666 | 0.7341 |
0.7664 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| G8QVY8 | GH151 | 1 | 642 | 5 | 661 | 0.7585 |
0.786 |
| S0EVP1 | GH151 | 1 | 642 | 14 | 675 | 0.7563 |
0.7903 |
| A0A415LJD9 | GH151 | 1 | 642 | 8 | 667 | 0.754 |
0.7844 |
| S2KW61 | GH151 | 1 | 642 | 10 | 709 | 0.7499 |
0.806 |
| WDR02573.1 | GH151 | 1 | 642 | 3 | 666 | 0.7491 |
0.7794 |
| G8PVK3 | GH151 | 1 | 642 | 12 | 690 | 0.7413 |
0.787 |
| A0A7G8USX4 | GH151 | 1 | 642 | 5 | 649 | 0.7388 |
0.7619 |
| A0A416HGB7 | GH42 | 1 | 641 | 8 | 692 | 0.7373 |
0.782 |
| A0A1Q2ME78 | GH42 | 1 | 641 | 3 | 695 | 0.734 |
0.7809 |
| A0A5B9W462 | GH151 | 1 | 642 | 33 | 723 | 0.7331 |
0.7902 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 6tvk-assembly1.cif.gz_AAA | 1 | 642 | 2 | 658 | 0.7609 |
0.7873 |
| 6t75-assembly2.cif.gz_EEE | 1 | 641 | 11 | 642 | 0.7256 |
0.7539 |
| 6t6g-assembly2.cif.gz_EEE | 1 | 641 | 11 | 650 | 0.7256 |
0.7496 |
| 7omi-assembly2.cif.gz_FFF | 1 | 641 | 11 | 650 | 0.7248 |
0.7487 |
| 6t7g-assembly2.cif.gz_EEE | 1 | 641 | 11 | 648 | 0.7245 |
0.7494 |
| 6t75-assembly1.cif.gz_BBB | 1 | 641 | 11 | 648 | 0.7244 |
0.7497 |
| 6t7g-assembly1.cif.gz_CCC | 1 | 642 | 14 | 654 | 0.7238 |
0.7488 |
| 5e9a-assembly1.cif.gz_A | 1 | 642 | 14 | 679 | 0.7226 |
0.7597 |
| 7oms-assembly2.cif.gz_DDD | 1 | 642 | 13 | 650 | 0.7222 |
0.7483 |
| 7omi-assembly2.cif.gz_BBB | 1 | 641 | 19 | 658 | 0.7204 |
0.7483 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P22795-F1-model_v4 | 1 | 642 | 5 | 591 | 0.7646 |
0.8188 |
| AF-D5JGG0-F1-model_v4 | 1 | 642 | 8 | 664 | 0.7259 |
0.7564 |
| AF-C8WV58-F1-model_v4 | 1 | 642 | 15 | 685 | 0.7235 |
0.7651 |
| AF-Q09HN2-F1-model_v4 | 1 | 641 | 10 | 676 | 0.7182 |
0.7557 |
| AF-Q0TUR6-F1-model_v4 | 1 | 641 | 15 | 689 | 0.716 |
0.7594 |
| AF-D4QFE7-F1-model_v4 | 1 | 640 | 20 | 689 | 0.7151 |
0.7592 |
| AF-C6H178-F1-model_v4 | 1 | 640 | 7 | 667 | 0.7147 |
0.7487 |
| AF-B9LW38-F1-model_v4 | 1 | 641 | 2 | 690 | 0.6999 |
0.7478 |
| AF-C7ASJ5-F1-model_v4 | 1 | 641 | 42 | 694 | 0.6997 |
0.7442 |
| AF-P94804-F1-model_v4 | 1 | 641 | 2 | 654 | 0.6997 |
0.7309 |