Cluster: HRGMv2_3899_CGC7
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_3899
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3899_6 | HRGMv2_3899_6_3 | 1369 | 2343 | + | 9.B.97.6.3 |
| pfam | HRGMv2_3899_6 | HRGMv2_3899_6_4 | 2462 | 3937 | + | MatE |
| NULL(UNKNOWN) | HRGMv2_3899_6 | HRGMv2_3899_6_5 | 4429 | 5748 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_3899_6 | HRGMv2_3899_6_6 | 5756 | 7003 | + | GT4 |
| CAZyme | HRGMv2_3899_6 | HRGMv2_3899_6_7 | 7310 | 8239 | + | GT113 |
Gene ID: HRGMv2_3899_6_3
Type: TC
Location: 1369 - 2343 (+)
Type: TC
Location: 1369 - 2343 (+)
Gene ID: HRGMv2_3899_6_4
Type: pfam
Location: 2462 - 3937 (+)
Type: pfam
Location: 2462 - 3937 (+)
Gene ID: HRGMv2_3899_6_5
Type:
Location: 4429 - 5748 (+)
Type:
Location: 4429 - 5748 (+)
Gene ID: HRGMv2_3899_6_6
Type: CAZyme
Location: 5756 - 7003 (+)
Type: CAZyme
Location: 5756 - 7003 (+)
Gene ID: HRGMv2_3899_6_7
Type: CAZyme
Location: 7310 - 8239 (+)
Type: CAZyme
Location: 7310 - 8239 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola_A
Species
Phocaeicola_A sp947581855
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.