PROTEIN: HRGMv2_3899_6_5
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Protein File & Metadata
Source:
HRGMv2_3899_6_5.pdb
Genome ID:
Protein ID:
HRGMv2_3899_6_5
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Protein Sequence
MSKSYDKIKK CFWIFFFFLL TEGIFRRWLL PEFNNMFLVI RDPFVIYAVV LGMRCGLFRS 60 GVAKFIMGIG ILCFIFALTI GHGNLLVAIY GARITVFYFP FIYIVSRVLS RDDVLKIGKV 120 LVLMIIPMVF LNIVQFFSPQ SSFVNIGVGG DEDGAGFGGA MGYFRPPGIF TFIAGLTDYY 180 ACSLGFLLYF YFCPEDAARM KLSRWLIILS VCAYFISIPV SISRTHFVQT GFILVFFVIM 240 AIRSGKSFSR VIMFALFVVI AIPLLFLNND TKLFIDVFME RFTGANESEG GLAKSAMERI 300 FGWLFRAIDK APLFGFGDGY FSNVGMKILH GDTNAYTGAI KNVVDSTEME WGRIVCEDGV 360 ILGILLIVAR IKIAYNVWRQ SLNALCRRCD YLSWLLMPMA AFSVCIYQCK APYNLGFMTL 420 MIISVLVSLR TNNQQVISN 439
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A0P0M3A3-F1-model_v4 | GT4 | 1 | 434 | 352 | 780 | 0.7246 |
0.9542 |
| AF-E6U9X7-F1-model_v4 | GT0 | 1 | 439 | 4 | 785 | 0.5623 |
0.7309 |
| AF-A0A517MXC4-F1-model_v4 | GT26 | 3 | 437 | 17 | 450 | 0.5317 |
0.6835 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A0P0M3A3 | GT4 | 1 | 434 | 352 | 780 | 0.7246 |
0.9542 |
| K0J022 | GT4 | 1 | 438 | 2 | 754 | 0.554 |
0.7102 |
| A0A9Q9IL13 | GT4 | 1 | 437 | 12 | 619 | 0.5519 |
0.7587 |
| D5MJ04 | GT9 | 1 | 439 | 19 | 532 | 0.5392 |
0.6934 |
| A0A517MXC4 | GT26 | 3 | 437 | 17 | 450 | 0.5317 |
0.6835 |
| B8IGI7 | GH16_7 | 3 | 435 | 17 | 458 | 0.5281 |
0.7075 |
| A0A0C5WHY3 | GT4 | 1 | 439 | 1 | 758 | 0.5149 |
0.658 |
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q6FFS6-F1-model_v4 | 1 | 431 | 14 | 423 | 0.626 |
0.7632 |
| AF-Q02729-F1-model_v4 | 1 | 434 | 3 | 404 | 0.6216 |
0.6938 |
| AF-Q6F7F9-F1-model_v4 | 1 | 439 | 2 | 414 | 0.6196 |
0.7412 |