Cluster: HRGMv2_3894_CGC6
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_3894
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3894_2 | HRGMv2_3894_2_123 | 141471 | 142766 | - | GH27 |
| sulfatase | HRGMv2_3894_2 | HRGMv2_3894_2_124 | 143000 | 144481 | + | S1_20 |
| NULL(UNKNOWN) | HRGMv2_3894_2 | HRGMv2_3894_2_125 | 144497 | 145741 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_3894_2 | HRGMv2_3894_2_126 | 145751 | 147547 | + | 2.A.21.3.2 |
| CAZyme | HRGMv2_3894_2 | HRGMv2_3894_2_127 | 147625 | 150570 | + | GH2 |
| CAZyme | HRGMv2_3894_2 | HRGMv2_3894_2_128 | 150575 | 153148 | + | CBM91 | GH43_12 | GH43_17 |
Gene ID: HRGMv2_3894_2_123
Type: CAZyme
Location: 141471 - 142766 (-)
Type: CAZyme
Location: 141471 - 142766 (-)
Gene ID: HRGMv2_3894_2_124
Type: sulfatase
Location: 143000 - 144481 (+)
Type: sulfatase
Location: 143000 - 144481 (+)
Gene ID: HRGMv2_3894_2_125
Type:
Location: 144497 - 145741 (+)
Type:
Location: 144497 - 145741 (+)
Gene ID: HRGMv2_3894_2_126
Type: TC
Location: 145751 - 147547 (+)
Type: TC
Location: 145751 - 147547 (+)
Gene ID: HRGMv2_3894_2_127
Type: CAZyme
Location: 147625 - 150570 (+)
Type: CAZyme
Location: 147625 - 150570 (+)
Gene ID: HRGMv2_3894_2_128
Type: CAZyme
Location: 150575 - 153148 (+)
Type: CAZyme
Location: 150575 - 153148 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Species
Phocaeicola ilei
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.