PROTEIN: HRGMv2_3894_2_125
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Protein File & Metadata
Source:
HRGMv2_3894_2_125.pdb
Genome ID:
Protein ID:
HRGMv2_3894_2_125
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Protein Sequence
MIKGLFSYGL LSIAMCMFSC SSVKMDRKPL AERVDSRDYP SAFMAWYNID MPEYPVDTEE 60 NRIKACAKHD LMWEEPLSQQ GEGVDLILGL TWDHKYHGLA TKFTKESLSH ALENRRRLQE 120 LNPNMVCLFE VRWRDAPMSF LPEDSDWWLR DENGNIKKGW LGGWEPFYLL DYKNGGLLDN 180 IARQAKIAVE CGVYDGIMLD WSGNLEVIKR IRKAIGKDKL IVVNIHDDIE DGMRYKDYIN 240 GAFMELNPID SLSMPVEGLK LYSKDDVNKR NWSKIEEALQ YYEENFLEPR VNCLEVWGNR 300 KDLRRMRATT TLGLTMSDGY VLYGDPNPLP TPDHYHDWYS FYDVNLGKPL AKGQRQTDGS 360 WKREFEGGTV LYNPYGNSDV TVSFDKEMKR VSDNSVACSF TVPQRDGDIF VPVK 414
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q10427-F1-model_v4 | 29 | 414 | 14 | 474 | 0.6056 |
0.7086 |
| AF-O13996-F1-model_v4 | 29 | 414 | 19 | 485 | 0.5984 |
0.7079 |
| AF-O14154-F1-model_v4 | 23 | 414 | 18 | 490 | 0.5828 |
0.6934 |
| AF-Q8VZ56-F1-model_v4 | 32 | 413 | 20 | 423 | 0.5822 |
0.6535 |
| AF-C1H7M3-F1-model_v4 | 22 | 414 | 9 | 493 | 0.5806 |
0.6981 |
| AF-P26612-F1-model_v4 | 36 | 414 | 1 | 495 | 0.577 |
0.6957 |
| AF-Q32HF4-F1-model_v4 | 35 | 414 | 1 | 495 | 0.5769 |
0.6935 |
| AF-A0A0D2G691-F1-model_v4 | 32 | 414 | 3 | 489 | 0.5746 |
0.6944 |
| AF-P07191-F1-model_v4 | 30 | 413 | 24 | 565 | 0.5738 |
0.7211 |
| AF-A0A1C1CPP7-F1-model_v4 | 32 | 414 | 3 | 489 | 0.5736 |
0.6933 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A5C5Y9P7 | GH27 | 12 | 414 | 20 | 867 | 0.6628 |
0.9253 |
| AF-A0A7H9DNT7-F1-model_v4 | GH13 | 3 | 414 | 15 | 461 | 0.6597 |
0.7183 |
| AF-L7W7H7-F1-model_v4 | GH13 | 1 | 414 | 9 | 475 | 0.655 |
0.7189 |
| AF-F6GE02-F1-model_v4 | GH13 | 1 | 413 | 10 | 473 | 0.6544 |
0.719 |
| AF-A0A5Q0GZL7-F1-model_v4 | GH0 | 34 | 414 | 51 | 427 | 0.6533 |
0.7408 |
| AF-A0A1G5FWF0-F1-model_v4 | GH13 | 1 | 414 | 9 | 474 | 0.6506 |
0.7149 |
| AF-A0A4Y1VHG8-F1-model_v4 | GH13 | 12 | 412 | 1 | 428 | 0.646 |
0.6989 |
| AF-A0A1T3ERL7-F1-model_v4 | GH13 | 26 | 412 | 1 | 427 | 0.6415 |
0.7144 |
| AF-A0A4P8E422-F1-model_v4 | GH13 | 25 | 412 | 1 | 427 | 0.638 |
0.7087 |
| AF-A0A6H3Q396-F1-model_v4 | GH13 | 3 | 413 | 11 | 473 | 0.637 |
0.7036 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A5C5Y9P7 | GH27 | 12 | 414 | 20 | 867 | 0.6628 |
0.9253 |
| A0A8J2V362 | GH168 | 24 | 414 | 19 | 384 | 0.6547 |
0.7274 |
| A0A518HSC2 | GH168 | 30 | 413 | 43 | 394 | 0.6335 |
0.7379 |
| A0A5B9MB72 | GH168 | 28 | 414 | 40 | 399 | 0.6325 |
0.7278 |
| A0A068NS94 | GH13 | 15 | 412 | 2 | 425 | 0.632 |
0.6865 |
| E5VAC7 | GH13 | 19 | 412 | 20 | 441 | 0.6293 |
0.6996 |
| A0A7M1XIH0 | GH13 | 30 | 413 | 1 | 424 | 0.6246 |
0.6992 |
| A0A517NMG3 | GH168 | 32 | 414 | 42 | 361 | 0.6223 |
0.7711 |
| A0A1B1SC40 | GH13 | 29 | 413 | 44 | 481 | 0.622 |
0.7312 |
| H1XUP9 | GH13 | 30 | 412 | 36 | 439 | 0.6214 |
0.7073 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 6sav-assembly2.cif.gz_B | 29 | 413 | 1 | 438 | 0.6235 |
0.7056 |
| 6sav-assembly1.cif.gz_A | 29 | 413 | 1 | 438 | 0.6225 |
0.705 |
| 3dhu-assembly3.cif.gz_C | 31 | 412 | 1 | 420 | 0.6218 |
0.6965 |
| 6sau-assembly1.cif.gz_A | 29 | 412 | 1 | 441 | 0.6209 |
0.7069 |
| 6sao-assembly1.cif.gz_A | 29 | 413 | 1 | 438 | 0.6207 |
0.702 |
| 4gkl-assembly2.cif.gz_B | 31 | 413 | 1 | 417 | 0.6171 |
0.6878 |
| 4gkl-assembly1.cif.gz_A | 31 | 413 | 1 | 418 | 0.6154 |
0.6874 |
| 5a2c-assembly1.cif.gz_A | 31 | 414 | 1 | 450 | 0.6068 |
0.6957 |
| 3vm7-assembly1.cif.gz_A | 29 | 414 | 1 | 470 | 0.6056 |
0.7035 |
| 4e2o-assembly1.cif.gz_A | 32 | 413 | 1 | 442 | 0.6047 |
0.6939 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q10427-F1-model_v4 | 29 | 414 | 14 | 474 | 0.6056 |
0.7086 |
| AF-P0C1B3-F1-model_v4 | 22 | 414 | 14 | 497 | 0.6001 |
0.7041 |
| AF-O13996-F1-model_v4 | 29 | 414 | 19 | 485 | 0.5984 |
0.7079 |
| AF-P0C1B4-F1-model_v4 | 22 | 414 | 14 | 497 | 0.5984 |
0.7024 |
| AF-Q02905-F1-model_v4 | 23 | 414 | 15 | 497 | 0.5984 |
0.7036 |
| AF-Q02906-F1-model_v4 | 22 | 414 | 14 | 497 | 0.5979 |
0.7016 |
| AF-P30292-F1-model_v4 | 22 | 414 | 14 | 497 | 0.5975 |
0.7019 |
| AF-P56271-F1-model_v4 | 29 | 414 | 1 | 476 | 0.5964 |
0.7014 |
| AF-Q08806-F1-model_v4 | 29 | 414 | 33 | 506 | 0.5847 |
0.7008 |
| AF-Q8VZ56-F1-model_v4 | 32 | 413 | 20 | 423 | 0.5822 |
0.6535 |