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Cluster: HRGMv2_3877_CGC23

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3877_20 HRGMv2_3877_20_8 7907 10114 - GH3
pfam HRGMv2_3877_20 HRGMv2_3877_20_9 10125 10898 - BetaGal_ABD_1 | BetaGal_gal-bd
CAZyme HRGMv2_3877_20 HRGMv2_3877_20_10 10895 13630 - GH2
CAZyme HRGMv2_3877_20 HRGMv2_3877_20_11 13719 14909 - GH88
NULL(UNKNOWN) HRGMv2_3877_20 HRGMv2_3877_20_12 15089 16663 - NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_3877_20 HRGMv2_3877_20_13 16779 18041 - SusE
TC HRGMv2_3877_20 HRGMv2_3877_20_14 18162 19829 - 8.A.46.1.6
TC HRGMv2_3877_20 HRGMv2_3877_20_15 19852 22878 - 1.B.14.6.1
Gene ID: HRGMv2_3877_20_8
Type: CAZyme
Location: 7907 - 10114 (-)
Gene ID: HRGMv2_3877_20_9
Type: pfam
Location: 10125 - 10898 (-)
Gene ID: HRGMv2_3877_20_10
Type: CAZyme
Location: 10895 - 13630 (-)
Gene ID: HRGMv2_3877_20_11
Type: CAZyme
Location: 13719 - 14909 (-)
Gene ID: HRGMv2_3877_20_12
Type:
Location: 15089 - 16663 (-)
Gene ID: HRGMv2_3877_20_13
Type: pfam
Location: 16779 - 18041 (-)
Gene ID: HRGMv2_3877_20_14
Type: TC
Location: 18162 - 19829 (-)
Gene ID: HRGMv2_3877_20_15
Type: TC
Location: 19852 - 22878 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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