PROTEIN: HRGMv2_3877_20_12
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Protein File & Metadata
Source:
HRGMv2_3877_20_12.pdb
Genome ID:
Protein ID:
HRGMv2_3877_20_12
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Protein Sequence
MDKRLLAVFM ALAFLCSASC GCSKSDDGAG DGGETVAGVT VKPAYNRSDV LHNPLNGWVM 60 YVSADYDPSY FDTEIYVPSL GQNVKVADYA SACYIRTKWS VLNPADGQYA WKDPDSKVYK 120 LVQAARERNL PIAFRVVVDG RDQGANTPQF VYDAGAKYAL ENAKYPDRKT PMPQDPIFQQ 180 YYEKFVQAFA EEFNDPDRTA FIDGYGLGKW GEGHSVAYDE NDVSAVDENT ETVKREVLDW 240 ITKLYAKYFT KVPLVINYHR VIGHPTSEGE ANPNSESLIA LAVSNGYCLR HDAFGMNNSG 300 WGYSTWEKAL AAQWRFKVPI IMEGGYIVSS HSYWNDPAGY RQGHPEDVRK GEYDASAEAH 360 VNMMDFRVGE ETQSWFNDAF DLVKSFVSEG GYRIYPDQVT VPDQVAAGSR VKVASRWRNM 420 GWGYMPNNLP QWNYKYKVAY ALLDESGAAR KVFVDDKCEP STWVDSKPFS YVFETPAIDL 480 PAGTYTWGIA IVDTTKENVP AIELAVNNEK TADGWVKLQT VKVN 524
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A0P0XA34-F1-model_v4 | 23 | 390 | 63 | 506 | 0.5102 |
0.7219 |
| AF-C0PJY8-F1-model_v4 | 31 | 390 | 55 | 503 | 0.5085 |
0.7361 |
| AF-Q10LG9-F1-model_v4 | 44 | 390 | 40 | 487 | 0.5054 |
0.751 |
| AF-A0A0R4J516-F1-model_v4 | 50 | 420 | 78 | 506 | 0.5043 |
0.7129 |
| AF-K0EUZ8-F1-model_v4 | 47 | 390 | 37 | 416 | 0.4961 |
0.6876 |
| AF-Q8VYW2-F1-model_v4 | 33 | 466 | 72 | 509 | 0.4921 |
0.6035 |
| AF-I1N3P8-F1-model_v4 | 40 | 421 | 206 | 699 | 0.4252 |
0.6513 |
| AF-K7LG54-F1-model_v4 | 25 | 421 | 208 | 699 | 0.4185 |
0.6185 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| UEG51675.1 | CBM92 | 26 | 524 | 39 | 532 | 0.8255 |
0.981 |
| AF-A0A165T486-F1-model_v4 | GH0 | 36 | 524 | 22 | 465 | 0.7413 |
0.8349 |
| AF-A0A859RHN9-F1-model_v4 | GH0 | 35 | 524 | 27 | 472 | 0.7295 |
0.8251 |
| AF-A0A4Y1VA35-F1-model_v4 | GH105 | 5 | 524 | 143 | 850 | 0.7294 |
0.9122 |
| A0A173ZNQ5 | GH105 | 4 | 524 | 143 | 850 | 0.7293 |
0.9104 |
| AF-A0A6P1UZ86-F1-model_v4 | GH0 | 35 | 524 | 27 | 472 | 0.7284 |
0.8239 |
| A0A1D8JPH9 | GH0 | 35 | 524 | 27 | 472 | 0.7271 |
0.8225 |
| AF-A0A7D6XQG7-F1-model_v4 | GH105 | 13 | 524 | 53 | 850 | 0.7242 |
0.9196 |
| AF-A0A4P6RFD0-F1-model_v4 | GH105 | 9 | 524 | 98 | 850 | 0.721 |
0.9085 |
| AF-U5VZX8-F1-model_v4 | CBM35 | 29 | 524 | 40 | 519 | 0.6251 |
0.7569 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| UEG51675.1 | CBM92 | 26 | 524 | 39 | 532 | 0.8255 |
0.981 |
| A0A173ZNQ5 | GH105 | 4 | 524 | 143 | 850 | 0.7293 |
0.9104 |
| USX25342.1 | CBM35 | 35 | 524 | 44 | 465 | 0.6194 |
0.8338 |
| A0A0G3BQ76 | CBM13 | 1 | 524 | 47 | 721 | 0.5854 |
0.6857 |
| UYZ64945.1 | CBM13 | 35 | 524 | 18 | 453 | 0.574 |
0.7871 |
| UYZ63624.1 | CBM13 | 35 | 524 | 24 | 512 | 0.5719 |
0.7374 |
| A0A810P131 | CBM35 | 29 | 524 | 43 | 522 | 0.5593 |
0.7602 |
| A0A5B8M8R3 | CBM6 | 36 | 524 | 51 | 534 | 0.5492 |
0.8186 |
| A0A3G3K0E0 | CBM35 | 22 | 524 | 27 | 470 | 0.5406 |
0.7941 |
| A0A494W981 | GH10 | 47 | 467 | 50 | 384 | 0.5321 |
0.7048 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 1ven-assembly1.cif.gz_A | 53 | 508 | 9 | 509 | 0.5157 |
0.5959 |
| 1veo-assembly1.cif.gz_A | 47 | 518 | 7 | 511 | 0.5067 |
0.5686 |
| 6jow-assembly2.cif.gz_D | 51 | 508 | 1 | 708 | 0.4333 |
0.585 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-O65258-F1-model_v4 | 47 | 390 | 89 | 526 | 0.4987 |
0.7589 |
| AF-Q8VYW2-F1-model_v4 | 33 | 466 | 72 | 509 | 0.4921 |
0.6035 |