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Cluster: HRGMv2_3781_CGC33

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3781_25 HRGMv2_3781_25_4 7602 9287 + GH39
NULL(UNKNOWN) HRGMv2_3781_25 HRGMv2_3781_25_5 9287 10216 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_3781_25 HRGMv2_3781_25_6 10365 12497 + GH3
TF HRGMv2_3781_25 HRGMv2_3781_25_7 12590 13426 - HTH_AraC
NULL(UNKNOWN) HRGMv2_3781_25 HRGMv2_3781_25_8 13691 14503 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_3781_25 HRGMv2_3781_25_9 14524 17478 + GH39
NULL(UNKNOWN) HRGMv2_3781_25 HRGMv2_3781_25_10 17812 20088 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_3781_25 HRGMv2_3781_25_11 20094 21263 - 2.A.4.7.3
Gene ID: HRGMv2_3781_25_4
Type: CAZyme
Location: 7602 - 9287 (+)
Gene ID: HRGMv2_3781_25_5
Type:
Location: 9287 - 10216 (+)
Gene ID: HRGMv2_3781_25_6
Type: CAZyme
Location: 10365 - 12497 (+)
Gene ID: HRGMv2_3781_25_7
Type: TF
Location: 12590 - 13426 (-)
Gene ID: HRGMv2_3781_25_8
Type:
Location: 13691 - 14503 (+)
Gene ID: HRGMv2_3781_25_9
Type: CAZyme
Location: 14524 - 17478 (+)
Gene ID: HRGMv2_3781_25_10
Type:
Location: 17812 - 20088 (+)
Gene ID: HRGMv2_3781_25_11
Type: TC
Location: 20094 - 21263 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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