PROTEIN: HRGMv2_3781_25_5
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Protein File & Metadata
Source:
HRGMv2_3781_25_5.pdb
Genome ID:
Protein ID:
HRGMv2_3781_25_5
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Protein Sequence
MYLRKKLFLF LLFPAVVNAA VVNFTIAPQK PWRKIEERTC SVEFSGKGPH PYLWLRPKTL 60 KPDTCYRLSF EAERGALPFA ALIREKIGTE WKHRGYADDL QLPAGPRRYS FYFRVAEPAP 120 GTSFALYPLT GDGGSDTIRN IQLEEVTDFR TNLLPEGEFE NGTALWPRHR KFADRVAIAD 180 SPGFFCGVRS LRMERKAGDM VAVISRDLPA LPGKTATIRF WARTERGTIP GILYLDFFRP 240 KYGYRNHLVR KFGFQVEPDW KEFTFRYPIP EEVNRYPALS EKMLRLQFHL PQGDRDAVVW 300 LDNLEYSLE 309
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-F1RER3-F1-model_v4 | 27 | 309 | 175 | 455 | 0.3858 |
0.6431 |
| AF-P97435-F1-model_v4 | 27 | 309 | 263 | 543 | 0.3636 |
0.6158 |
| AF-Q9Y493-F1-model_v4 | 18 | 309 | 36 | 367 | 0.363 |
0.6303 |
| AF-K7MNJ0-F1-model_v4 | 21 | 309 | 42 | 368 | 0.3575 |
0.5713 |
| AF-P98073-F1-model_v4 | 27 | 309 | 219 | 499 | 0.3574 |
0.5968 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A5C4WQE0 | CBM22 , CBM9 , GH10 | 20 | 309 | 81 | 379 | 0.4321 |
0.7084 |
| AF-A0A7T3RCY4-F1-model_v4 | CBM61 , GH53 | 43 | 309 | 23 | 394 | 0.4168 |
0.5427 |
| QSF43977.1 | CBM4 , CBM54 , CBM6 , GH16_3 | 1 | 309 | 184 | 1509 | 0.3954 |
0.6622 |
| A0A3D9KA00 | CBM54 | 9 | 309 | 152 | 986 | 0.3775 |
0.6112 |
| AF-I0ID58-F1-model_v4 | GH9 | 20 | 308 | 4 | 313 | 0.3727 |
0.6266 |
| A0A117EDY1 | CBM16 | 16 | 309 | 355 | 669 | 0.3403 |
0.5616 |
| A0A2V2Z0X9 | CBM22 , CBM9 , GH10 | 22 | 309 | 34 | 349 | 0.3392 |
0.6026 |
| AF-A0A0B5AV27-F1-model_v4 | CBM4 , GH16_3 | 26 | 307 | 437 | 975 | 0.3292 |
0.5463 |
| UJF34298.1 | GH141 | 1 | 309 | 644 | 1087 | 0.3261 |
0.5508 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A5C4WQE0 | CBM22 , CBM9 , GH10 | 20 | 309 | 81 | 379 | 0.4321 |
0.7084 |
| UZO80237.1 | PL1 | 1 | 309 | 53 | 834 | 0.419 |
0.6353 |
| A0A1V4HPP5 | CBM13 , CBM16 | 10 | 309 | 513 | 852 | 0.4176 |
0.6795 |
| CAG5077333.1 | CBM0 , CBM22 , GH10 | 10 | 309 | 24 | 351 | 0.4146 |
0.6446 |
| F8F6C8 | CBM4 , CBM54 , CBM6 , GH16_3 | 1 | 309 | 1 | 1607 | 0.4022 |
0.6843 |
| QSF43977.1 | CBM4 , CBM54 , CBM6 , GH16_3 | 1 | 309 | 184 | 1509 | 0.3954 |
0.6622 |
| A0A7U2FB61 | CBM18 | 44 | 309 | 246 | 527 | 0.3897 |
0.5687 |
| UKS27947.1 | CBM32 | 4 | 307 | 540 | 900 | 0.3814 |
0.5791 |
| A0A6S6R7R0 | CBM61 , GH53 | 40 | 309 | 266 | 565 | 0.38 |
0.5611 |
| A0A3D9KA00 | CBM54 | 9 | 309 | 152 | 986 | 0.3775 |
0.6112 |
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-B5CY96-F1-model_v4 | 9 | 309 | 26 | 727 | 0.4039 |
0.5841 |
| AF-P98072-F1-model_v4 | 27 | 309 | 233 | 515 | 0.3687 |
0.6165 |
| AF-P97435-F1-model_v4 | 27 | 309 | 263 | 543 | 0.3636 |
0.6158 |
| AF-P98073-F1-model_v4 | 27 | 309 | 219 | 499 | 0.3574 |
0.5968 |
| AF-B2RLK2-F1-model_v4 | 11 | 309 | 963 | 1332 | 0.3037 |
0.536 |
| AF-Q28983-F1-model_v4 | 19 | 309 | 22 | 308 | 0.2986 |
0.5764 |