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Cluster: HRGMv2_3764_CGC22

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3764_12 HRGMv2_3764_12_43 55137 56426 + 1.I.1.1.3
NULL(UNKNOWN) HRGMv2_3764_12 HRGMv2_3764_12_44 56539 57147 + NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_3764_12 HRGMv2_3764_12_45 57412 57606 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_3764_12 HRGMv2_3764_12_46 57642 59087 + GH109
NULL(UNKNOWN) HRGMv2_3764_12 HRGMv2_3764_12_47 59420 60562 + NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_3764_12 HRGMv2_3764_12_48 60567 61526 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_3764_12 HRGMv2_3764_12_49 61545 62699 - 2.A.1.26.1
Gene ID: HRGMv2_3764_12_43
Type: TC
Location: 55137 - 56426 (+)
Gene ID: HRGMv2_3764_12_44
Type:
Location: 56539 - 57147 (+)
Gene ID: HRGMv2_3764_12_45
Type:
Location: 57412 - 57606 (+)
Gene ID: HRGMv2_3764_12_46
Type: CAZyme
Location: 57642 - 59087 (+)
Gene ID: HRGMv2_3764_12_47
Type:
Location: 59420 - 60562 (+)
Gene ID: HRGMv2_3764_12_48
Type:
Location: 60567 - 61526 (+)
Gene ID: HRGMv2_3764_12_49
Type: TC
Location: 61545 - 62699 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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