dbCAN Logo

PROTEIN: HRGMv2_3764_12_48

Loading protein structure...

Protein File & Metadata
Download PDB File
Source:
HRGMv2_3764_12_48.pdb
Genome ID:
HRGMv2_3764
Protein ID:
HRGMv2_3764_12_48

Loading protein structure information...

Detailed structural information will appear here after analysis...

Protein Sequence 
MTPRMHPYAV   LSSGFLLLST   GLFSCTLLST   VSSGGPETPR   TLGARMEKHT   EVLQKDIGAR 60
NAGQPKSMEA   AAKYIAGNFS   DMGYAVTMQP   VSGGNSEKGE   AIYNILVYKP   GLYSSNQSIV 120
VGANYDSSGR   RNNGSGTALL   LETARGLKDI   PTNHNIYFVA   YANGAEPTGK   SIPSGACVHA 180
GALSGSIGAA   NILGMINLEP   QKPDAGGERK   QPAPESSREA   VLFVTTPHGR   KFAGQCAAPF 240
AKSWDQAPTT   FYREPSALTG   NDRHYAVLGI   PTVSCRCRYP   VTDARTEEYV   QALTDMIHQV 300
ADNDAPEPAK   NADQDGKTS 319
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-P76482-F1-model_v4 40 303 35 323 0.6843 0.8389
AF-Q32CH7-F1-model_v4 37 304 24 345 0.6341 0.7899
AF-P10423-F1-model_v4 37 304 24 345 0.6338 0.7895
AF-Q9N516-F1-model_v4 40 304 24 353 0.6337 0.8228
AF-A0A0H3H216-F1-model_v4 37 304 24 345 0.6327 0.7922
AF-Q8ZMF4-F1-model_v4 37 303 24 344 0.6312 0.7921
AF-A0A0N4UML8-F1-model_v4 40 303 25 325 0.6262 0.7732
AF-Q9VRQ9-F1-model_v4 40 308 35 334 0.6204 0.7676
AF-G4VD11-F1-model_v4 40 303 47 335 0.6198 0.7765
AF-U7Q5N4-F1-model_v4 40 312 108 401 0.6151 0.8127
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
AF-A0A170RYW8-F1-model_v4 CBM12 41 304 64 341 0.5326 0.7809
AF-A0A2H1EB84-F1-model_v4 GH114 40 319 69 530 0.5274 0.7744
AF-A0A0K3AYS4-F1-model_v4 CBM5 41 304 41 316 0.5018 0.7772
AF-A0A0N9IBZ3-F1-model_v4 CBM5 41 304 43 318 0.5002 0.7755
AF-K0K8E6-F1-model_v4 CBM5 41 304 47 322 0.499 0.7763
A0A640SM19 CBM61 41 304 71 348 0.495 0.7788
AF-A0A7S7J113-F1-model_v4 CBM50 40 312 119 603 0.4893 0.8093
AF-A0A7H8S7E3-F1-model_v4 GH3 34 314 220 974 0.4717 0.804
AF-A0A291Q3Z8-F1-model_v4 CBM12 29 304 531 910 0.4321 0.7626
AF-A0A5P9WU54-F1-model_v4 CBM12 31 304 547 911 0.4315 0.7685
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A160T4H4 GH1 40 311 3 404 0.5859 0.7734
A0A2H1EB84 GH114 40 319 69 530 0.5274 0.7744
UTA66659.1 CBM48 40 308 37 514 0.522 0.8116
K0K8E6 CBM5 41 304 47 322 0.499 0.7763
A0A640SM19 CBM61 41 304 71 348 0.495 0.7788
A0A1S6HQJ8 CBM5 40 306 129 405 0.4928 0.803
A0A7S7J113 CBM50 40 312 119 603 0.4893 0.8093
A0A7H8S7E3 GH3 34 314 220 974 0.4717 0.804
A0A291Q3Z8 CBM12 29 304 531 910 0.4321 0.7626
A0A077R2I8 GT58 40 310 545 876 0.4013 0.7436
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
3gux-assembly2.cif.gz_B 41 303 8 246 0.7003 0.8294
3b7i-assembly1.cif.gz_A 40 306 16 291 0.6987 0.8078
2anp-assembly1.cif.gz_A 40 306 16 291 0.6984 0.8074
1amp-assembly1.cif.gz_A 40 306 16 291 0.6983 0.8073
3gux-assembly1.cif.gz_A 41 303 8 247 0.6983 0.8257
3b3s-assembly1.cif.gz_A 40 306 16 291 0.6983 0.8072
3b3t-assembly1.cif.gz_A 40 306 16 291 0.6965 0.8054
6zeq-assembly1.cif.gz_A 40 306 20 301 0.6927 0.8132
1tkj-assembly1.cif.gz_A 41 302 4 277 0.6801 0.7834
1tkf-assembly1.cif.gz_A 41 302 4 273 0.6797 0.7769
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-P76482-F1-model_v4 40 303 35 323 0.6843 0.8389
AF-P10423-F1-model_v4 37 304 24 345 0.6338 0.7895
AF-D4B4V2-F1-model_v4 1 306 1 368 0.6284 0.7116
AF-D4DF09-F1-model_v4 1 306 1 368 0.6255 0.708
AF-E5A6Z0-F1-model_v4 40 318 20 358 0.625 0.8243
AF-E9DUF4-F1-model_v4 40 313 103 391 0.6249 0.8066
AF-A4R640-F1-model_v4 40 313 106 399 0.6246 0.8136
AF-B2B3P6-F1-model_v4 24 311 23 395 0.6241 0.7712
AF-A7UI11-F1-model_v4 40 302 94 373 0.62 0.8136
AF-D4DHE3-F1-model_v4 40 302 94 373 0.6199 0.8134
Download Full SwissProt Results