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Cluster: HRGMv2_2994_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2994_1 HRGMv2_2994_1_23 24964 26316 - 2.A.38.4.1
NULL(UNKNOWN) HRGMv2_2994_1 HRGMv2_2994_1_24 26318 29113 - NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_2994_1 HRGMv2_2994_1_25 29134 31047 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_2994_1 HRGMv2_2994_1_26 31044 32045 - GT2
pfam HRGMv2_2994_1 HRGMv2_2994_1_27 32378 33313 - Prok-RING_1
TC HRGMv2_2994_1 HRGMv2_2994_1_28 33871 34134 + 8.A.8.1.4
NULL(UNKNOWN) HRGMv2_2994_1 HRGMv2_2994_1_29 34324 35058 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2994_1 HRGMv2_2994_1_30 35278 37023 + 1.A.34.1.2
Gene ID: HRGMv2_2994_1_23
Type: TC
Location: 24964 - 26316 (-)
Gene ID: HRGMv2_2994_1_24
Type:
Location: 26318 - 29113 (-)
Gene ID: HRGMv2_2994_1_25
Type:
Location: 29134 - 31047 (-)
Gene ID: HRGMv2_2994_1_26
Type: CAZyme
Location: 31044 - 32045 (-)
Gene ID: HRGMv2_2994_1_27
Type: pfam
Location: 32378 - 33313 (-)
Gene ID: HRGMv2_2994_1_28
Type: TC
Location: 33871 - 34134 (+)
Gene ID: HRGMv2_2994_1_29
Type:
Location: 34324 - 35058 (+)
Gene ID: HRGMv2_2994_1_30
Type: TC
Location: 35278 - 37023 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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