PROTEIN: HRGMv2_2994_1_24
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Protein File & Metadata
Source:
HRGMv2_2994_1_24.pdb
Genome ID:
Protein ID:
HRGMv2_2994_1_24
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Protein Sequence
MINEENNGSQ PELDISLGDT VPEQKPEYYA SPEIPAEKPE APAASGKPGV FSSDWFFMAA 60 LYVITLVIHV LMTQVTTMFN LTPDEYAVTG VAAWANGLDW SATVSAGGYY GYFQSLFYIP 120 VFKLFSDPMT QYRAMIILNG FIMSFAPVIV YYLSRKWFNV RKLSSVFISV VCGMYPSYLL 180 LTKYTWNETM CCILPWVFAL LMYKSLRSHK DAPHTAKAVF MQQLWAVLAG LTLIAAYASH 240 GRMLALTAAG VVLELIVLIT MKRRLFSLVG FFTSCASGFV IDKFLKHYIQ AELWLSGTKE 300 KASVNTIENM FSRISNIDAE KLEHFPQTLF GHFFYFISST WGFGAVCIVL IFSGIVMYYV 360 SRRRIRNSDE APVTAEGKPQ TYIGTSLAIF CWYALLAIGA IFVVSVAFKA TSSVYDTRAD 420 TAIFGRYIET FFPIAIFPAL IMIYRRRFTA KHCFGALLVA SFVFVMTEMF TVSAVVGDGS 480 TTKNIVGAMI LGIAPLRIGE GLKDTITETT FLKIIGVVML LLLALVIARL IKKRGESLFN 540 IVTIPLGALL IYTTLYGFDN YTVVQGKNAQ YGANYVTQAL SMIDDCPYND VLCFSMKGER 600 YSKAQFLFPE IKIHLASNTK KLKELETCPD FILCDREDNL NMWIDDIYLV GDINNNVQLY 660 ACSENAINWA QAAGLEMTGS GAMTYTGENI PGTSSVTRSG HTAMLPEGSA VYTNYFLLYN 720 KGKYTATIKG SGLTDLSVAL TSDKKANDMP YEITSNTGSE LTLTFSVTDK TENVQLKLTN 780 KNGGSAVSVD ELSVAMSSYT IKEYSGDSLV LGDGCTTYGT SAVVPYGSEI SSLNLIMHNA 840 EKLQFQIKGD NLNVIDLTLT SNGKELDGLV ETFSNYVTIT FDLPEPTEDL KLTISNNSSE 900 DASIYTLAIR RMSGQKLAVL PKVSGVNISV S 931
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-K0F428-F1-model_v4 | 48 | 924 | 24 | 663 | 0.5526 |
0.6736 |
| AF-K0EVV4-F1-model_v4 | 48 | 924 | 24 | 661 | 0.5523 |
0.6736 |
| AF-Q8MXQ3-F1-model_v4 | 50 | 784 | 108 | 780 | 0.4871 |
0.6251 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A1Z4H5Q8-F1-model_v4 | GT83 | 3 | 773 | 1 | 615 | 0.5839 |
0.7137 |
| AF-A0A097EMF3-F1-model_v4 | GT83 | 51 | 676 | 1 | 574 | 0.5837 |
0.7277 |
| AF-A0ZKS4-F1-model_v4 | GT83 | 3 | 882 | 1 | 609 | 0.5827 |
0.7108 |
| AF-B7KL96-F1-model_v4 | GT83 | 45 | 917 | 16 | 606 | 0.5802 |
0.7249 |
| AF-K9QBD8-F1-model_v4 | GT83 | 8 | 804 | 1 | 617 | 0.5795 |
0.7082 |
| AF-K9P2J7-F1-model_v4 | GT83 | 37 | 918 | 4 | 604 | 0.5791 |
0.7115 |
| AF-K9YZE0-F1-model_v4 | GT83 | 45 | 916 | 6 | 588 | 0.5781 |
0.7198 |
| AF-B1WXE4-F1-model_v4 | GT83 | 8 | 722 | 1 | 612 | 0.5779 |
0.704 |
| AF-A0A0D6ABL9-F1-model_v4 | GT83 | 2 | 681 | 1 | 580 | 0.5766 |
0.7163 |
| AF-A0A077JH81-F1-model_v4 | GT83 | 5 | 768 | 2 | 628 | 0.5753 |
0.6947 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A097EMF3 | GT83 | 51 | 676 | 1 | 574 | 0.5837 |
0.7277 |
| K9P2J7 | GT83 | 37 | 918 | 4 | 604 | 0.5791 |
0.7115 |
| K9YZE0 | GT83 | 45 | 916 | 6 | 588 | 0.5781 |
0.7198 |
| A0A077JH81 | GT83 | 5 | 768 | 2 | 628 | 0.5753 |
0.6947 |
| A0A1J0KUK4 | GT83 | 50 | 700 | 7 | 600 | 0.5751 |
0.7117 |
| BDD85719.1 | GT83 | 48 | 869 | 1 | 568 | 0.5737 |
0.7211 |
| A5GRP2 | GT83 | 45 | 917 | 1 | 571 | 0.5724 |
0.721 |
| A0A182ANN6 | GT83 | 51 | 884 | 1 | 585 | 0.5716 |
0.7078 |
| UZQ52919.1 | GT83 | 5 | 917 | 1 | 616 | 0.5707 |
0.6928 |
| A2BXP5 | GT83 | 45 | 918 | 8 | 599 | 0.5706 |
0.7131 |
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q8MXQ3-F1-model_v4 | 50 | 784 | 108 | 780 | 0.4871 |
0.6251 |