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Cluster: HRGMv2_2866_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2866_11 HRGMv2_2866_11_12 9156 10352 + GT4
NULL(UNKNOWN) HRGMv2_2866_11 HRGMv2_2866_11_13 10349 11608 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_2866_11 HRGMv2_2866_11_14 11601 12401 + GT2
NULL(UNKNOWN) HRGMv2_2866_11 HRGMv2_2866_11_15 12737 14347 + NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_2866_11 HRGMv2_2866_11_16 14365 15561 + ABC2_membrane
TC HRGMv2_2866_11 HRGMv2_2866_11_17 15577 16320 + 3.A.1.103.1
pfam HRGMv2_2866_11 HRGMv2_2866_11_18 16352 17239 + NTP_transferase | NTP_transf_3
pfam HRGMv2_2866_11 HRGMv2_2866_11_19 17354 19729 + LRR_4 | LRR_6
CAZyme HRGMv2_2866_11 HRGMv2_2866_11_20 19916 22198 + GH5_4
TF HRGMv2_2866_11 HRGMv2_2866_11_21 22336 23193 + HTH_AraC
CAZyme HRGMv2_2866_11 HRGMv2_2866_11_22 23190 24980 - GH146
TC HRGMv2_2866_11 HRGMv2_2866_11_23 25078 26445 - 2.A.66.1.33
TC HRGMv2_2866_11 HRGMv2_2866_11_24 26842 28164 + 2.A.79.1.3
Gene ID: HRGMv2_2866_11_12
Type: CAZyme
Location: 9156 - 10352 (+)
Gene ID: HRGMv2_2866_11_13
Type:
Location: 10349 - 11608 (+)
Gene ID: HRGMv2_2866_11_14
Type: CAZyme
Location: 11601 - 12401 (+)
Gene ID: HRGMv2_2866_11_15
Type:
Location: 12737 - 14347 (+)
Gene ID: HRGMv2_2866_11_16
Type: pfam
Location: 14365 - 15561 (+)
Gene ID: HRGMv2_2866_11_17
Type: TC
Location: 15577 - 16320 (+)
Gene ID: HRGMv2_2866_11_18
Type: pfam
Location: 16352 - 17239 (+)
Gene ID: HRGMv2_2866_11_19
Type: pfam
Location: 17354 - 19729 (+)
Gene ID: HRGMv2_2866_11_20
Type: CAZyme
Location: 19916 - 22198 (+)
Gene ID: HRGMv2_2866_11_21
Type: TF
Location: 22336 - 23193 (+)
Gene ID: HRGMv2_2866_11_22
Type: CAZyme
Location: 23190 - 24980 (-)
Gene ID: HRGMv2_2866_11_23
Type: TC
Location: 25078 - 26445 (-)
Gene ID: HRGMv2_2866_11_24
Type: TC
Location: 26842 - 28164 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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