PROTEIN: HRGMv2_2866_11_15
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Protein File & Metadata
Source:
HRGMv2_2866_11_15.pdb
Genome ID:
Protein ID:
HRGMv2_2866_11_15
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Protein Sequence
MPDFRTLRID AEKLARYEKR QAGQSTEICL DDIYAVLSRT CGISAENGAA AEADAELCLC 60 RADPIMKRVW DTARENGKKI IVTSDMYLPR GVIEKLLTKN GFCGYSRLYL SNERGCGKWD 120 GGIWKLICSN EKGTVVHIGD NPVSDVKNAQ KYGIAAVHYP NVNERGKRYR PTEMSPIIGS 180 AYSGIVNGRL YTENVSPAYE YGFKCGGLLI LGFCRFIRSR AKEFGADKIL FLARDGYIVK 240 KVYDMLYPED KTEYVYWSRA AASKLCADIF PQDYIRRFVK QKSGKGFSVA EILSAMGMPE 300 MKTSLAVSDK LDAHNEGRLV PEIYAKMPEI TSHLKESQSG AEEYFRNIFK DCRKAVTVDC 360 GWAGSGNIML EAYARRTLGL DVSLKGLLAG SNSANQSDSD LSETYFASDR LEAYCFSSAQ 420 NRNFYEFHNP SKKHNVFFEL LFGAPFPSCT GFDENGPVFD GEAENSELIN EIQKGELDFI 480 SAYLDIFEKY PFMLNIHGSD AYAPFAAAAS DGGKYLCKVF ENAVFDELAN GKKDKI 536
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q8ZQU8-F1-model_v4 | 1 | 536 | 34 | 589 | 0.7508 |
0.8269 |
| AF-Q0P8I2-F1-model_v4 | 1 | 536 | 408 | 874 | 0.5273 |
0.7878 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A974WXG9 | GT4 | 1 | 536 | 476 | 1025 | 0.6405 |
0.8646 |
| WAJ24550.1 | GT2 | 1 | 536 | 379 | 946 | 0.6333 |
0.8346 |
| AF-U5MZQ8-F1-model_v4 | GT2 | 1 | 536 | 378 | 949 | 0.6319 |
0.836 |
| U5MZQ8 | GT2 | 1 | 536 | 378 | 949 | 0.6319 |
0.836 |
| AF-A0A1D7XMN6-F1-model_v4 | GT2 | 1 | 536 | 378 | 950 | 0.6248 |
0.8262 |
| UKD35065.1 | GT111 | 1 | 536 | 314 | 821 | 0.6198 |
0.8349 |
| A0A975E9I4 | GT2 | 1 | 536 | 460 | 999 | 0.6192 |
0.8114 |
| AF-A0A078BDS9-F1-model_v4 | GT2 | 1 | 536 | 471 | 1012 | 0.6155 |
0.8093 |
| A0A0U3BMS4 | GT111 | 1 | 536 | 344 | 854 | 0.6121 |
0.8273 |
| AF-A0A0U3BMS4-F1-model_v4 | GT111 | 1 | 536 | 344 | 854 | 0.6121 |
0.8273 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A974WXG9 | GT4 | 1 | 536 | 476 | 1025 | 0.6405 |
0.8646 |
| WAJ24550.1 | GT2 | 1 | 536 | 379 | 946 | 0.6333 |
0.8346 |
| U5MZQ8 | GT2 | 1 | 536 | 378 | 949 | 0.6319 |
0.836 |
| UKD35065.1 | GT111 | 1 | 536 | 314 | 821 | 0.6198 |
0.8349 |
| A0A975E9I4 | GT2 | 1 | 536 | 460 | 999 | 0.6192 |
0.8114 |
| A0A078BDS9 | GT2 | 1 | 536 | 471 | 1012 | 0.6155 |
0.8093 |
| A0A0U3BMS4 | GT111 | 1 | 536 | 344 | 854 | 0.6121 |
0.8273 |
| WII09730.1 | GT111 | 1 | 536 | 431 | 936 | 0.6068 |
0.8199 |
| AKJ53103.1 | GT8 | 1 | 536 | 355 | 850 | 0.5785 |
0.8015 |
| A6M2M4 | GT2 | 1 | 536 | 43 | 582 | 0.5743 |
0.8265 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 8a0m-assembly1.cif.gz_B | 1 | 536 | 285 | 845 | 0.6161 |
0.7966 |
| 8a0m-assembly2.cif.gz_C | 1 | 536 | 419 | 970 | 0.5964 |
0.808 |
| 8a0m-assembly2.cif.gz_D | 1 | 536 | 314 | 856 | 0.5963 |
0.7739 |
| 8a0m-assembly1.cif.gz_A | 1 | 536 | 418 | 969 | 0.5959 |
0.8072 |
| 8a0c-assembly1.cif.gz_A | 1 | 536 | 423 | 974 | 0.5941 |
0.8059 |
| 8a0c-assembly1.cif.gz_B | 1 | 536 | 423 | 971 | 0.592 |
0.8023 |
| 7shg-assembly1.cif.gz_A | 48 | 523 | 224 | 591 | 0.5057 |
0.7601 |
Structural Homologs - SwissProt
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.