PROTEIN: HRGMv2_2866_11_13
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Protein File & Metadata
Source:
HRGMv2_2866_11_13.pdb
Genome ID:
Protein ID:
HRGMv2_2866_11_13
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Protein Sequence
MNAEVCIKKS YDVICGAAEE YIAPVIYSFA RFIIGRAVEL GIKRLYFFSR DGYTVMRAAE 60 EICRKENISL EMSYFYCSRY SLRMAAYRFK DSSAYDRLFN ESYRMTAKTV LMRAGFETDE 120 RRLVYDELGF LSDEEKLMNR NDFRSFCSGL KTSAEFWKIL SEKSDTAYYL TADYVRQCGM 180 DKFSHIGVVD LGWTGSMQLT LKRLLRSFNI KCSVTGFYLG MLEEPEISEG NTYETWLFEG 240 GRDCFTKAWF CQNVLECLCT APHGMTVGYA KKDGEICPVF AENENDPELV SRVSDIITDF 300 ARQASGYGYI EKKDKKNALN KLKKLMFTPD EKIAESFGAF GFCDDVGESY HGSLCGKAAP 360 KDIISCILRK KGTVRPYWFY GAVSHCGRFW RNIAGYLYYF SEAARYFIIA VKKRGRNNG 419
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q8ZQU8-F1-model_v4 | 11 | 396 | 240 | 631 | 0.6492 |
0.8495 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A0U5F758-F1-model_v4 | GT2 | 1 | 401 | 1 | 403 | 0.6017 |
0.7797 |
| AF-A0A2I6S8V6-F1-model_v4 | GT2 | 11 | 411 | 652 | 1067 | 0.585 |
0.8791 |
| AF-W0DNV7-F1-model_v4 | GT2 | 11 | 412 | 672 | 1091 | 0.5826 |
0.8787 |
| A0A1I7GMF6 | GT2 | 11 | 408 | 670 | 1083 | 0.5811 |
0.883 |
| A0A9J7AXY3 | GT2 | 1 | 407 | 1 | 399 | 0.5759 |
0.782 |
| V4JBH5 | GT2 | 8 | 404 | 1 | 398 | 0.5742 |
0.7936 |
| A0A974WXG9 | GT4 | 11 | 401 | 675 | 1078 | 0.5654 |
0.8775 |
| AF-A0A0H3KC95-F1-model_v4 | GT2 | 12 | 404 | 12 | 405 | 0.5617 |
0.7935 |
| QRK05458.1 | GT4 | 9 | 418 | 269 | 992 | 0.55 |
0.8324 |
| AF-W8KPG0-F1-model_v4 | GT2 | 11 | 405 | 8 | 398 | 0.5467 |
0.7862 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A0U5F758 | GT2 | 1 | 401 | 1 | 403 | 0.6017 |
0.7797 |
| A0A2I6S8V6 | GT2 | 11 | 411 | 652 | 1067 | 0.585 |
0.8791 |
| A0A1I7GMF6 | GT2 | 11 | 408 | 670 | 1083 | 0.5811 |
0.883 |
| A0A9J7AXY3 | GT2 | 1 | 407 | 1 | 399 | 0.5759 |
0.782 |
| V4JBH5 | GT2 | 8 | 404 | 1 | 398 | 0.5742 |
0.7936 |
| A0A974WXG9 | GT4 | 11 | 401 | 675 | 1078 | 0.5654 |
0.8775 |
| A0A0H3KC95 | GT2 | 12 | 404 | 12 | 405 | 0.5617 |
0.7935 |
| QRK05458.1 | GT4 | 9 | 418 | 269 | 992 | 0.55 |
0.8324 |
| W8KPG0 | GT2 | 11 | 405 | 8 | 398 | 0.5467 |
0.7862 |
| M4S1R1 | GT4 | 16 | 404 | 256 | 724 | 0.5318 |
0.8159 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 7shg-assembly1.cif.gz_A | 12 | 340 | 253 | 591 | 0.5845 |
0.8644 |
| 8a0m-assembly1.cif.gz_B | 8 | 400 | 500 | 876 | 0.5315 |
0.819 |
| 8a0c-assembly1.cif.gz_A | 8 | 400 | 638 | 1028 | 0.528 |
0.821 |
| 8a0m-assembly2.cif.gz_C | 8 | 400 | 634 | 1024 | 0.5272 |
0.818 |
| 8a0m-assembly1.cif.gz_A | 8 | 397 | 633 | 1024 | 0.5265 |
0.8201 |
| 8a0c-assembly1.cif.gz_B | 8 | 397 | 638 | 1026 | 0.5193 |
0.811 |
| 8a0m-assembly2.cif.gz_D | 8 | 400 | 529 | 887 | 0.4992 |
0.8059 |
Structural Homologs - SwissProt
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.