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Cluster: HRGMv2_2832_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2832_22 HRGMv2_2832_22_25 36143 37018 + 3.A.1.1.11
TC HRGMv2_2832_22 HRGMv2_2832_22_26 37031 37963 + 3.A.1.1.11
NULL(UNKNOWN) HRGMv2_2832_22 HRGMv2_2832_22_27 37967 39367 + NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_2832_22 HRGMv2_2832_22_28 39600 39803 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_2832_22 HRGMv2_2832_22_29 39815 42025 + GH36
NULL(UNKNOWN) HRGMv2_2832_22 HRGMv2_2832_22_30 42039 43004 + NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_2832_22 HRGMv2_2832_22_31 43017 43907 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_2832_22 HRGMv2_2832_22_32 43926 46412 + GH94
CAZyme HRGMv2_2832_22 HRGMv2_2832_22_33 46426 47652 + GH37
CAZyme HRGMv2_2832_22 HRGMv2_2832_22_34 47768 49267 + GH78
Gene ID: HRGMv2_2832_22_25
Type: TC
Location: 36143 - 37018 (+)
Gene ID: HRGMv2_2832_22_26
Type: TC
Location: 37031 - 37963 (+)
Gene ID: HRGMv2_2832_22_27
Type:
Location: 37967 - 39367 (+)
Gene ID: HRGMv2_2832_22_28
Type:
Location: 39600 - 39803 (+)
Gene ID: HRGMv2_2832_22_29
Type: CAZyme
Location: 39815 - 42025 (+)
Gene ID: HRGMv2_2832_22_30
Type:
Location: 42039 - 43004 (+)
Gene ID: HRGMv2_2832_22_31
Type:
Location: 43017 - 43907 (+)
Gene ID: HRGMv2_2832_22_32
Type: CAZyme
Location: 43926 - 46412 (+)
Gene ID: HRGMv2_2832_22_33
Type: CAZyme
Location: 46426 - 47652 (+)
Gene ID: HRGMv2_2832_22_34
Type: CAZyme
Location: 47768 - 49267 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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