PROTEIN: HRGMv2_2832_22_30
Loading protein structure...
Loading protein structure...
Protein File & Metadata
Source:
HRGMv2_2832_22_30.pdb
Genome ID:
Protein ID:
HRGMv2_2832_22_30
Loading protein structure information...
Detailed structural information will appear here after analysis...
Protein Sequence
MNKLNQEGTL YASDKVGFGI YHFAQGGMDS RRIADSETFA LDGDDRVQCD RQEQLDYMNF 60 YIYRLDKSCY SHLYRIKEMG CGTWVYYEPF VSVEENGKRR VLLRSGWREE ITTLVDGVKQ 120 AGLWDTVIGF QYDEPLLKVE TDVFEEFTGF MAGFGKRQLA IFSYYEIVEG SNPSASDPEY 180 GALVHLITPE SCRYLTDVGF DLYDKPEPQK FRELNEIMFK MLGRDNLYLW MVPTTWTRGE 240 NPEYTEDLCL ESLEMCREIL LESKYPGGLF CYTWRSWGIH NEALDYHFHT ANRNRWERLE 300 NRMIEMGREL REISLKPLPK E 321
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P06760-F1-model_v4 | 1 | 314 | 264 | 629 | 0.5269 |
0.7253 |
| AF-A0A0K0DXM9-F1-model_v4 | 1 | 313 | 265 | 630 | 0.5251 |
0.7186 |
| AF-Q95Q32-F1-model_v4 | 1 | 314 | 260 | 622 | 0.524 |
0.7143 |
| AF-Q9V9T9-F1-model_v4 | 1 | 314 | 293 | 666 | 0.5127 |
0.7185 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A518BTK4-F1-model_v4 | GH0 | 6 | 312 | 14 | 358 | 0.5611 |
0.7122 |
| AF-A0A5K1KWP6-F1-model_v4 | GH30_8 | 14 | 316 | 45 | 332 | 0.555 |
0.7078 |
| AF-A0A1S8LJI1-F1-model_v4 | GH30_8 | 14 | 316 | 45 | 332 | 0.5544 |
0.7089 |
| AF-A0A4P8ETL7-F1-model_v4 | GH30_8 | 14 | 316 | 46 | 333 | 0.5543 |
0.7075 |
| AF-A0A0B4S841-F1-model_v4 | GH30_8 | 14 | 316 | 46 | 333 | 0.5534 |
0.7064 |
| AF-A0A7Z2J6S3-F1-model_v4 | GH30_8 | 14 | 316 | 47 | 334 | 0.5527 |
0.7063 |
| AF-A8FDV2-F1-model_v4 | GH30_8 | 14 | 316 | 47 | 334 | 0.5526 |
0.7062 |
| AF-A0A5C0WM57-F1-model_v4 | GH30_8 | 14 | 316 | 53 | 340 | 0.5512 |
0.708 |
| AF-A0A1S7B8Y2-F1-model_v4 | GH2 | 1 | 316 | 216 | 595 | 0.5462 |
0.7308 |
| AF-A0A7L5SN41-F1-model_v4 | GH2 | 1 | 315 | 220 | 597 | 0.5457 |
0.7319 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| BDF47820.1 | GH2 | 1 | 312 | 224 | 567 | 0.5473 |
0.7252 |
| A0A173N073 | GH2 | 1 | 313 | 237 | 572 | 0.5405 |
0.7167 |
| UDL84245.1 | GH2 | 1 | 315 | 230 | 608 | 0.5366 |
0.725 |
| A0A1J0V4D6 | GH2 | 1 | 310 | 219 | 583 | 0.5341 |
0.7191 |
| J3JXW8 | GH2 | 1 | 314 | 241 | 605 | 0.5248 |
0.717 |
| WHE45717.1 | GH2 | 1 | 313 | 258 | 631 | 0.5244 |
0.7267 |
| A6CYB5 | GH2 | 1 | 314 | 271 | 597 | 0.524 |
0.7033 |
| A0A090LF77 | GH2 | 1 | 313 | 266 | 631 | 0.5238 |
0.717 |
| A0A5N0M394 | GH30_8 | 14 | 316 | 148 | 460 | 0.5237 |
0.7038 |
| A0A7R9AXE2 | GH2 | 1 | 314 | 260 | 617 | 0.5163 |
0.7015 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 4h41-assembly1.cif.gz_B | 16 | 309 | 21 | 321 | 0.6127 |
0.69 |
| 6bo6-assembly1.cif.gz_A | 1 | 315 | 151 | 493 | 0.5819 |
0.7282 |
| 6bjw-assembly1.cif.gz_A | 1 | 317 | 212 | 582 | 0.5514 |
0.7272 |
| 6lej-assembly1.cif.gz_B-2 | 1 | 315 | 215 | 583 | 0.5502 |
0.7315 |
| 7kgy-assembly1.cif.gz_C-4 | 1 | 318 | 242 | 591 | 0.5502 |
0.7267 |
| 6lem-assembly1.cif.gz_B | 1 | 315 | 211 | 579 | 0.5495 |
0.729 |
| 6d4o-assembly1.cif.gz_A | 1 | 317 | 215 | 589 | 0.5488 |
0.7266 |
| 6lel-assembly1.cif.gz_B-2 | 1 | 315 | 218 | 586 | 0.5487 |
0.7296 |
| 4jhz-assembly1.cif.gz_A | 1 | 315 | 221 | 592 | 0.5484 |
0.7328 |
| 5czk-assembly1.cif.gz_A | 1 | 316 | 221 | 596 | 0.5483 |
0.7314 |
Structural Homologs - SwissProt
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.