PROTEIN: HRGMv2_2832_22_27
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Protein File & Metadata
Source:
HRGMv2_2832_22_27.pdb
Genome ID:
Protein ID:
HRGMv2_2832_22_27
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Protein Sequence
MKKISIIYGE LKNGVQKKAV EVLSELLIEY THEYPTCFCY DDKAELSDAL KIYIGTKANN 60 PLIKAVSEKE LTHAEEYFIK VNDGRVYIEG FDDAGVLYGC IDFYNKYILK LEYPDNPDTF 120 AVNPLEKPLP DFEYTSYPAV KNRGIWTWGH VIYDYRGFID NMVKLKMNTV IIWNDYLPVN 180 AREMVDYAHS CGIRLFWGFS WGWGTDCSVF SPDNLIANTA DIAEKYEKEY SKSGGDGIYF 240 QSFTELKTDV LNGRIIAEAV CELVNKTAAL IFEKHPELEL QFGLHATSVK NQLQYIEKVD 300 PRIRIVWEDC GSFPFSYIPR DVSDFESTEK FVKKIAALRG TDDKFGVVTK GFVKLDWTAF 360 RHLDGAVNIG KGSKSFKNNR VTRKSKIWRY IQACWLSNAD KAYYTVKSLC ETKRGDLYIT 420 PLVEDGMFEE NIMYPVALFS EMLWDTGANL SEMMTDVALR DYVDFA 466
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A044STU2-F1-model_v4 | 1 | 466 | 49 | 528 | 0.6446 |
0.7086 |
| AF-Q22492-F1-model_v4 | 1 | 466 | 50 | 535 | 0.6418 |
0.7091 |
| AF-G4VHP9-F1-model_v4 | 1 | 466 | 40 | 515 | 0.6397 |
0.6901 |
| AF-K0EJ69-F1-model_v4 | 1 | 466 | 59 | 520 | 0.6368 |
0.6948 |
| AF-A0A2R8PV02-F1-model_v4 | 1 | 466 | 45 | 519 | 0.634 |
0.6885 |
| AF-P20060-F1-model_v4 | 1 | 466 | 51 | 524 | 0.6334 |
0.6899 |
| AF-A2BHD8-F1-model_v4 | 1 | 466 | 52 | 528 | 0.6313 |
0.6908 |
| AF-J9EXE5-F1-model_v4 | 1 | 466 | 49 | 529 | 0.6291 |
0.6921 |
| AF-A0A1D8PNR7-F1-model_v4 | 1 | 466 | 43 | 540 | 0.6147 |
0.6841 |
| AF-A0A175WH58-F1-model_v4 | 1 | 466 | 37 | 562 | 0.6097 |
0.6867 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A5B8JHV9-F1-model_v4 | GH20 | 1 | 464 | 24 | 475 | 0.6625 |
0.7055 |
| A0A506VFV2 | GH20 | 1 | 464 | 26 | 507 | 0.6541 |
0.7009 |
| AF-A0A4P7SL18-F1-model_v4 | GH20 | 1 | 466 | 23 | 498 | 0.6505 |
0.6954 |
| AF-A0A1H1LJ68-F1-model_v4 | GH20 | 1 | 466 | 17 | 514 | 0.6407 |
0.6874 |
| AF-A0A679H3K8-F1-model_v4 | GH20 | 1 | 466 | 24 | 525 | 0.6403 |
0.6952 |
| AF-A0A0E3XHF8-F1-model_v4 | GH20 | 1 | 466 | 38 | 532 | 0.6395 |
0.6978 |
| AF-F0S5C9-F1-model_v4 | GH20 | 1 | 466 | 43 | 522 | 0.6392 |
0.6893 |
| QUB47514.1 | GH20 | 1 | 466 | 45 | 537 | 0.6381 |
0.703 |
| AF-G8T9P9-F1-model_v4 | GH20 | 1 | 466 | 39 | 522 | 0.6357 |
0.6874 |
| QZT38868.1 | GH20 | 1 | 466 | 46 | 523 | 0.6335 |
0.694 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A4P8YNI4 | GH20 | 1 | 464 | 33 | 500 | 0.6616 |
0.706 |
| A0A506VFV2 | GH20 | 1 | 464 | 26 | 507 | 0.6541 |
0.7009 |
| A0A448L4N0 | GH20 | 1 | 466 | 42 | 528 | 0.6514 |
0.7072 |
| A0A1R3T4M0 | GH20 | 1 | 466 | 40 | 513 | 0.6511 |
0.698 |
| QUT74189.1 | GH20 | 1 | 466 | 42 | 508 | 0.6499 |
0.696 |
| C5C022 | GH20 | 1 | 466 | 19 | 489 | 0.6459 |
0.6841 |
| C7QYQ9 | GH20 | 1 | 466 | 20 | 471 | 0.644 |
0.6885 |
| A0A6B3LFR2 | GH20 | 1 | 466 | 44 | 533 | 0.6437 |
0.7017 |
| WFM82981.1 | GH20 | 1 | 464 | 45 | 528 | 0.6436 |
0.7026 |
| G8QY04 | GH20 | 1 | 466 | 23 | 468 | 0.6416 |
0.7079 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 4c7f-assembly1.cif.gz_A | 1 | 466 | 25 | 486 | 0.6569 |
0.6968 |
| 3lmy-assembly1.cif.gz_A-2 | 1 | 466 | 18 | 472 | 0.6559 |
0.6951 |
| 5bro-assembly1.cif.gz_A-2 | 1 | 466 | 20 | 483 | 0.6547 |
0.6879 |
| 4c7g-assembly1.cif.gz_A | 1 | 466 | 25 | 486 | 0.6534 |
0.6929 |
| 1m04-assembly1.cif.gz_A | 1 | 466 | 30 | 491 | 0.6534 |
0.6961 |
| 5fcz-assembly1.cif.gz_A | 1 | 466 | 30 | 491 | 0.6533 |
0.6961 |
| 1m03-assembly1.cif.gz_A | 1 | 466 | 30 | 491 | 0.6528 |
0.6952 |
| 7bwg-assembly1.cif.gz_A | 1 | 466 | 21 | 478 | 0.6491 |
0.6875 |
| 4pys-assembly2.cif.gz_B | 1 | 466 | 18 | 469 | 0.6462 |
0.6931 |
| 7dvb-assembly3.cif.gz_C | 1 | 466 | 19 | 516 | 0.6435 |
0.6929 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q619W7-F1-model_v4 | 1 | 466 | 47 | 531 | 0.6489 |
0.7151 |
| AF-Q22492-F1-model_v4 | 1 | 466 | 50 | 535 | 0.6418 |
0.7091 |
| AF-P49009-F1-model_v4 | 1 | 466 | 44 | 550 | 0.6081 |
0.6771 |
| AF-A1DD80-F1-model_v4 | 1 | 466 | 36 | 658 | 0.5584 |
0.7229 |
| AF-A1CC12-F1-model_v4 | 1 | 466 | 39 | 658 | 0.558 |
0.7222 |
| AF-Q5AQZ4-F1-model_v4 | 1 | 466 | 34 | 665 | 0.5574 |
0.7237 |
| AF-B8NGU1-F1-model_v4 | 1 | 466 | 35 | 657 | 0.557 |
0.7206 |
| AF-Q4WW45-F1-model_v4 | 1 | 466 | 36 | 658 | 0.5563 |
0.7202 |
| AF-B0Y2K1-F1-model_v4 | 1 | 466 | 36 | 658 | 0.5559 |
0.7193 |
| AF-Q99024-F1-model_v4 | 1 | 466 | 41 | 668 | 0.5545 |
0.7198 |