Cluster: HRGMv2_2748_CGC18

🧬 Cluster Details

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
TC	HRGMv2_2748_1	HRGMv2_2748_1_1536	1607255	1609627	+	9.A.8.1.6
pfam	HRGMv2_2748_1	HRGMv2_2748_1_1537	1609661	1609813	+	FeoB_associated
CAZyme	HRGMv2_2748_1	HRGMv2_2748_1_1538	1609920	1611041	+	GT4
CAZyme	HRGMv2_2748_1	HRGMv2_2748_1_1539	1611038	1612027	+	GT2
NULL(UNKNOWN)	HRGMv2_2748_1	HRGMv2_2748_1_1540	1612027	1613247	+	NULL(UNKNOWN) [View Structural Homologs]
CAZyme	HRGMv2_2748_1	HRGMv2_2748_1_1541	1613248	1614513	+	GT4
CAZyme	HRGMv2_2748_1	HRGMv2_2748_1_1542	1614510	1615526	+	GT2
CAZyme	HRGMv2_2748_1	HRGMv2_2748_1_1543	1615547	1616563	+	GT2
CAZyme	HRGMv2_2748_1	HRGMv2_2748_1_1544	1616564	1617544	+	GT2
CAZyme	HRGMv2_2748_1	HRGMv2_2748_1_1545	1617691	1618914	+	GT4
CAZyme	HRGMv2_2748_1	HRGMv2_2748_1_1546	1618911	1619972	+	GT2

Gene ID: HRGMv2_2748_1_1536
Type: TC
Location: 1607255 - 1609627 (+)

Gene ID: HRGMv2_2748_1_1537
Type: pfam
Location: 1609661 - 1609813 (+)

Gene ID: HRGMv2_2748_1_1538
Type: CAZyme
Location: 1609920 - 1611041 (+)

Gene ID: HRGMv2_2748_1_1539
Type: CAZyme
Location: 1611038 - 1612027 (+)

Gene ID: HRGMv2_2748_1_1540
Type:
Location: 1612027 - 1613247 (+)

Gene ID: HRGMv2_2748_1_1541
Type: CAZyme
Location: 1613248 - 1614513 (+)

Gene ID: HRGMv2_2748_1_1542
Type: CAZyme
Location: 1614510 - 1615526 (+)

Gene ID: HRGMv2_2748_1_1543
Type: CAZyme
Location: 1615547 - 1616563 (+)

Gene ID: HRGMv2_2748_1_1544
Type: CAZyme
Location: 1616564 - 1617544 (+)

Gene ID: HRGMv2_2748_1_1545
Type: CAZyme
Location: 1617691 - 1618914 (+)

Gene ID: HRGMv2_2748_1_1546
Type: CAZyme
Location: 1618911 - 1619972 (+)

Taxonomic Lineage

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Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.