PROTEIN: HRGMv2_2748_1_1540
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Protein File & Metadata
Source:
HRGMv2_2748_1_1540.pdb
Genome ID:
Protein ID:
HRGMv2_2748_1_1540
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Protein Sequence
MRILLVLDRV ENAASANALM GLRLAEQLLA RDHTVHILTL WDGLHTPPAP PQGAVQHLLA 60 FADERLMNEA LENGRKGGTP VAVRLARLCA HPAAVAAAFR QLVLKAPRRT VDSRREIERL 120 DAEFHFDAVC AVCAPYRAAF ALETAAIGGK KFLWQLDPYA ANRDYTAPGG YAREGQLLDA 180 LDGSFITPQA VPDYADGAPL ASRRGKVHPL GFPALLPRTT FSGGHDTVQC VFCGSLYPAL 240 REPGFALALF SALHDSAVTL TMAGGGWERF AADADKAAAA MGANFVRPGL LPPEDAAALE 300 DRADVLVSLG NACDNQLPSK LFGYFGTGKP VLHLAVSKAD PALPYLARYP LALVLHAEDG 360 ATPAAASALG RWLHEVCGRR LPFAEVAALY PEFTPEYVAN EFLRWI 406
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q5FAD9-F1-model_v4 | 2 | 406 | 1 | 352 | 0.7565 |
0.8329 |
| AF-Q2G1J7-F1-model_v4 | 1 | 406 | 4 | 400 | 0.7557 |
0.7889 |
| AF-Q5F734-F1-model_v4 | 1 | 406 | 4 | 354 | 0.7556 |
0.8327 |
| AF-K0F3N9-F1-model_v4 | 1 | 406 | 1 | 360 | 0.7554 |
0.8341 |
| AF-Q8CWU0-F1-model_v4 | 1 | 406 | 3 | 384 | 0.7552 |
0.8041 |
| AF-O05083-F1-model_v4 | 1 | 406 | 1 | 353 | 0.7545 |
0.8286 |
| AF-Q2G255-F1-model_v4 | 1 | 406 | 1 | 367 | 0.753 |
0.8228 |
| AF-Q2G1K0-F1-model_v4 | 1 | 406 | 1 | 369 | 0.7474 |
0.8043 |
| AF-F4IBV4-F1-model_v4 | 1 | 406 | 9 | 397 | 0.7454 |
0.7952 |
| AF-O07147-F1-model_v4 | 1 | 406 | 1 | 360 | 0.7448 |
0.8236 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A0W0VWK4 | GT4 | 1 | 406 | 1 | 430 | 0.8137 |
0.8524 |
| UVR78230.1 | GT0 | 1 | 406 | 1 | 410 | 0.8125 |
0.8341 |
| A0A139KCQ5 | GT0 | 1 | 406 | 1 | 411 | 0.8123 |
0.8351 |
| A0A1W1Z2J3 | GT0 | 1 | 406 | 2 | 382 | 0.8099 |
0.8568 |
| AF-M1VK77-F1-model_v4 | GT4 | 1 | 406 | 7 | 423 | 0.8043 |
0.8396 |
| A0A943T7V0 | GT0 | 1 | 406 | 1 | 407 | 0.8024 |
0.8254 |
| AF-T1SF07-F1-model_v4 | GT4 | 1 | 406 | 7 | 423 | 0.8008 |
0.8349 |
| AF-A0A1P8VR31-F1-model_v4 | GT4 | 1 | 406 | 7 | 423 | 0.8005 |
0.8354 |
| AF-A0A4D6GU89-F1-model_v4 | GT4 | 1 | 406 | 10 | 386 | 0.7942 |
0.8519 |
| AF-A6T0A6-F1-model_v4 | GT4 | 1 | 406 | 1 | 432 | 0.7941 |
0.8364 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A0W0VWK4 | GT4 | 1 | 406 | 1 | 430 | 0.8137 |
0.8524 |
| A0A517ZPG7 | GT4 | 1 | 406 | 1 | 431 | 0.8063 |
0.8588 |
| T1SF07 | GT4 | 1 | 406 | 7 | 423 | 0.8008 |
0.8349 |
| B0VFW7 | GT4 | 1 | 406 | 4 | 421 | 0.7964 |
0.8318 |
| A0A4D6GU89 | GT4 | 1 | 406 | 10 | 386 | 0.7942 |
0.8519 |
| A6T0A6 | GT4 | 1 | 406 | 1 | 432 | 0.7941 |
0.8364 |
| A0A7S9RGP3 | GT4 | 1 | 405 | 2 | 392 | 0.7928 |
0.8267 |
| A0A127VKF0 | GT4 | 1 | 406 | 10 | 431 | 0.7922 |
0.8369 |
| A0A9E9KY05 | GT4 | 1 | 406 | 1 | 394 | 0.7905 |
0.8283 |
| A0A1X9Z8T2 | GT4 | 1 | 406 | 2 | 397 | 0.7899 |
0.8243 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 3mbo-assembly1.cif.gz_B | 1 | 406 | 2 | 362 | 0.7711 |
0.8413 |
| 3mbo-assembly3.cif.gz_F | 1 | 406 | 2 | 362 | 0.7679 |
0.8383 |
| 3mbo-assembly4.cif.gz_G | 1 | 406 | 2 | 358 | 0.7634 |
0.8376 |
| 2jjm-assembly1.cif.gz_B | 1 | 406 | 1 | 355 | 0.7556 |
0.8291 |
| 3mbo-assembly1.cif.gz_A | 1 | 406 | 2 | 365 | 0.752 |
0.8208 |
| 3mbo-assembly4.cif.gz_H | 1 | 406 | 1 | 362 | 0.7519 |
0.8215 |
| 3mbo-assembly3.cif.gz_E | 1 | 406 | 1 | 368 | 0.7501 |
0.8144 |
| 6n1x-assembly1.cif.gz_A | 1 | 406 | 4 | 371 | 0.7492 |
0.8157 |
| 3mbo-assembly2.cif.gz_C | 1 | 406 | 1 | 366 | 0.7491 |
0.8153 |
| 7qsg-assembly1.cif.gz_A | 1 | 406 | 1 | 375 | 0.748 |
0.8041 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-D4GU66-F1-model_v4 | 7 | 406 | 1 | 368 | 0.7585 |
0.8192 |
| AF-O05083-F1-model_v4 | 1 | 406 | 1 | 353 | 0.7545 |
0.8286 |
| AF-Q8KIU8-F1-model_v4 | 1 | 406 | 2 | 394 | 0.7464 |
0.7866 |
| AF-Q46634-F1-model_v4 | 1 | 406 | 1 | 350 | 0.7451 |
0.8211 |
| AF-O07147-F1-model_v4 | 1 | 406 | 1 | 360 | 0.7448 |
0.8236 |
| AF-Q9R9N0-F1-model_v4 | 1 | 406 | 1 | 336 | 0.7439 |
0.8395 |
| AF-Q93P60-F1-model_v4 | 1 | 406 | 1 | 384 | 0.743 |
0.7953 |
| AF-Q0P9C7-F1-model_v4 | 1 | 406 | 1 | 365 | 0.7404 |
0.803 |
| AF-Q7TY88-F1-model_v4 | 1 | 406 | 1 | 364 | 0.7403 |
0.8152 |
| AF-P9WMZ4-F1-model_v4 | 1 | 406 | 1 | 364 | 0.7388 |
0.8128 |