Cluster: HRGMv2_2678_CGC10
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2678
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2678_13 | HRGMv2_2678_13_6 | 4367 | 5833 | - | 4.C.1.1.4 |
| TC | HRGMv2_2678_13 | HRGMv2_2678_13_7 | 5872 | 7338 | - | 4.C.1.1.4 |
| pfam | HRGMv2_2678_13 | HRGMv2_2678_13_8 | 7713 | 8828 | + | Acyl_transf_3 |
| NULL(UNKNOWN) | HRGMv2_2678_13 | HRGMv2_2678_13_9 | 8893 | 9687 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_2678_13 | HRGMv2_2678_13_10 | 9722 | 11323 | + | GT4 |
Gene ID: HRGMv2_2678_13_6
Type: TC
Location: 4367 - 5833 (-)
Type: TC
Location: 4367 - 5833 (-)
Gene ID: HRGMv2_2678_13_7
Type: TC
Location: 5872 - 7338 (-)
Type: TC
Location: 5872 - 7338 (-)
Gene ID: HRGMv2_2678_13_8
Type: pfam
Location: 7713 - 8828 (+)
Type: pfam
Location: 7713 - 8828 (+)
Gene ID: HRGMv2_2678_13_9
Type:
Location: 8893 - 9687 (+)
Type:
Location: 8893 - 9687 (+)
Gene ID: HRGMv2_2678_13_10
Type: CAZyme
Location: 9722 - 11323 (+)
Type: CAZyme
Location: 9722 - 11323 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faecalibacterium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.