PROTEIN: HRGMv2_2678_13_9
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Protein File & Metadata
Source:
HRGMv2_2678_13_9.pdb
Genome ID:
Protein ID:
HRGMv2_2678_13_9
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Protein Sequence
MNHDTPVTPA ALQARVAELE QQLKLSDEGV SQLAQRCLEL EQQLLVCQTE LAKHSTETDN 60 FTLTLPQLFY DTGSGFSPRE CLIAAEDAYN ELTHEVSVTF VLPEDARAVR LDPGELACCI 120 TDLAISDERI SFQSVNGLLL QEDSLLFLDV DPNLSLHCTT GFGAGMKFAV NYHYYPLGRF 180 LHEQPGKSLL RALNDLKLKN AAAAQEADEV LQASRAECMR LNQQLLTLQG IQHEYQVSLE 240 TMRASSSWRL TAPLRRLLTL LRGH 264
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A135YZW4 | GT2 | 38 | 254 | 124 | 440 | 0.4101 |
0.6161 |
| AF-F5X1R9-F1-model_v4 | GT2 | 59 | 246 | 252 | 436 | 0.3946 |
0.6786 |
| AF-A0A2Z4PLP0-F1-model_v4 | GT4 | 53 | 232 | 390 | 566 | 0.3717 |
0.7254 |
| AF-A0A7L8W6I6-F1-model_v4 | GT4 | 53 | 240 | 81 | 576 | 0.3601 |
0.6625 |
| A0A7G8TFN0 | GT2 , GT4 | 44 | 249 | 160 | 425 | 0.3347 |
0.7005 |
| A0A2U1CC34 | GT4 | 54 | 255 | 212 | 388 | 0.3282 |
0.718 |
| URJ59865.1 | GT2 , GT4 | 20 | 207 | 98 | 358 | 0.2982 |
0.7002 |
| A0A4P9E9V2 | GT2 , GT4 | 56 | 210 | 544 | 1329 | 0.2708 |
0.7791 |
| C6LFR9 | GT2 , GT4 | 11 | 214 | 5 | 708 | 0.2707 |
0.5954 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A135YZW4 | GT2 | 38 | 254 | 124 | 440 | 0.4101 |
0.6161 |
| A0A2Z4PLP0 | GT4 | 53 | 232 | 390 | 566 | 0.3717 |
0.7254 |
| A0A7G8TFN0 | GT2 , GT4 | 44 | 249 | 160 | 425 | 0.3347 |
0.7005 |
| A0A2U1CC34 | GT4 | 54 | 255 | 212 | 388 | 0.3282 |
0.718 |
| URJ59865.1 | GT2 , GT4 | 20 | 207 | 98 | 358 | 0.2982 |
0.7002 |
| A0A4P9E9V2 | GT2 , GT4 | 56 | 210 | 544 | 1329 | 0.2708 |
0.7791 |
| C6LFR9 | GT2 , GT4 | 11 | 214 | 5 | 708 | 0.2707 |
0.5954 |
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs - SwissProt
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.