dbCAN Logo

Cluster: HRGMv2_2521_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2521_2 HRGMv2_2521_2_2 4684 6720 - GT101 | GT8
NULL(UNKNOWN) HRGMv2_2521_2 HRGMv2_2521_2_3 6800 6997 - NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_2521_2 HRGMv2_2521_2_4 6990 8321 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_2521_2 HRGMv2_2521_2_5 8314 9852 - GT4
TC HRGMv2_2521_2 HRGMv2_2521_2_6 9865 12213 - 3.A.5.10.1
pfam HRGMv2_2521_2 HRGMv2_2521_2_7 12217 13098 - Sec-ASP3
TC HRGMv2_2521_2 HRGMv2_2521_2_8 13101 14588 - 3.A.5.10.1
pfam HRGMv2_2521_2 HRGMv2_2521_2_9 14599 16122 - Asp1
pfam HRGMv2_2521_2 HRGMv2_2521_2_10 16125 17315 - SecY
CAZyme HRGMv2_2521_2 HRGMv2_2521_2_11 17436 18440 - GT113
Gene ID: HRGMv2_2521_2_2
Type: CAZyme
Location: 4684 - 6720 (-)
Gene ID: HRGMv2_2521_2_3
Type:
Location: 6800 - 6997 (-)
Gene ID: HRGMv2_2521_2_4
Type:
Location: 6990 - 8321 (-)
Gene ID: HRGMv2_2521_2_5
Type: CAZyme
Location: 8314 - 9852 (-)
Gene ID: HRGMv2_2521_2_6
Type: TC
Location: 9865 - 12213 (-)
Gene ID: HRGMv2_2521_2_7
Type: pfam
Location: 12217 - 13098 (-)
Gene ID: HRGMv2_2521_2_8
Type: TC
Location: 13101 - 14588 (-)
Gene ID: HRGMv2_2521_2_9
Type: pfam
Location: 14599 - 16122 (-)
Gene ID: HRGMv2_2521_2_10
Type: pfam
Location: 16125 - 17315 (-)
Gene ID: HRGMv2_2521_2_11
Type: CAZyme
Location: 17436 - 18440 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List