PROTEIN: HRGMv2_2521_2_4
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Protein File & Metadata
Source:
HRGMv2_2521_2_4.pdb
Genome ID:
Protein ID:
HRGMv2_2521_2_4
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Protein Sequence
MLNLFDNFDQ ATFDLLRSQR SAQIKIPTVV INDDGFLPAE VESPIKFFGQ YNENKLPLYF 60 DQLPVPKYWR ILSTSSQGEV YDLDQKRADI IYRSNDNSRQ VKEVRWLDRQ GKINWADHYN 120 NNGYHFATTF YEQGQPIWRK YYNKYQECFL EWNLRAGSLF LTDNGQKRYF ASWIEFVKYY 180 LTVCDFKLDH LFYNTLNQGL SVTLALPDNG TDTLFWHEPL LDNKLPGNMQ FLMEHSTRTK 240 HIIFQRYSDW QQMKSTLTGN KYVDFSYLGM IYPHPRGNKL RPEVLILTNS DEIVAATTLV 300 KQLPQVKFHI AAVTEMSEKL LAYQQYSNVE LYPNVSRQRV KQLIADCDIY LDINRQNEIL 360 DAVRGAFEQN MLIVGFDETL HEPQFVAPQN VFKVTEASQM GERILNALQK PALMKKLIDT 420 QRKLASEVSV QDYRNRIGAI EHD 443
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q2FUW8-F1-model_v4 | 1 | 443 | 1 | 452 | 0.9033 |
0.9269 |
| AF-Q2G0L2-F1-model_v4 | 1 | 443 | 1 | 496 | 0.6164 |
0.6737 |
| AF-Q2FUW3-F1-model_v4 | 1 | 443 | 2 | 513 | 0.6157 |
0.6808 |
| AF-Q2G0L3-F1-model_v4 | 1 | 441 | 1 | 490 | 0.6095 |
0.6628 |
| AF-Q2FUW7-F1-model_v4 | 1 | 443 | 1 | 502 | 0.5921 |
0.6537 |
| AF-O05083-F1-model_v4 | 1 | 441 | 3 | 353 | 0.558 |
0.643 |
| AF-Q2G1K0-F1-model_v4 | 1 | 443 | 3 | 369 | 0.5565 |
0.6294 |
| AF-Q0P9C5-F1-model_v4 | 1 | 443 | 3 | 358 | 0.5459 |
0.6256 |
| AF-Q8CWU0-F1-model_v4 | 1 | 443 | 4 | 384 | 0.5384 |
0.6016 |
| AF-Q2G255-F1-model_v4 | 1 | 443 | 2 | 372 | 0.5194 |
0.5905 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A517D4T4-F1-model_v4 | GT8 | 1 | 443 | 1 | 443 | 0.9947 |
0.9979 |
| AF-A0A1V4FJ59-F1-model_v4 | GT8 | 1 | 443 | 1 | 441 | 0.9897 |
0.9956 |
| AF-R9WGB3-F1-model_v4 | GT8 | 1 | 443 | 1 | 441 | 0.9894 |
0.9954 |
| AF-A0A1X8V910-F1-model_v4 | GT8 | 1 | 443 | 1 | 441 | 0.9874 |
0.9937 |
| AF-Q74L35-F1-model_v4 | GT8 | 1 | 443 | 1 | 442 | 0.9849 |
0.9906 |
| AF-S5NEI9-F1-model_v4 | GT8 | 1 | 443 | 1 | 441 | 0.9842 |
0.9937 |
| AF-A0A347T5X7-F1-model_v4 | GT8 | 1 | 443 | 1 | 441 | 0.9839 |
0.9935 |
| AF-A0A7D9N524-F1-model_v4 | GT8 | 1 | 443 | 1 | 442 | 0.9836 |
0.9895 |
| AF-A0A6P1EQH6-F1-model_v4 | GT8 | 1 | 443 | 1 | 442 | 0.9831 |
0.9891 |
| AF-A0A7L9VSV5-F1-model_v4 | GT8 | 1 | 443 | 1 | 442 | 0.9816 |
0.9877 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A7H9E6L8 | GT8 | 1 | 443 | 1 | 443 | 0.9778 |
0.9898 |
| A0A0D4CK58 | GT8 | 1 | 442 | 1 | 447 | 0.9675 |
0.9794 |
| F2I915 | GT8 | 1 | 438 | 1 | 444 | 0.9512 |
0.9703 |
| A0A8E2VFN6 | GT8 | 1 | 438 | 1 | 439 | 0.95 |
0.9649 |
| A0A7T7NYN3 | GT8 | 1 | 440 | 1 | 441 | 0.9489 |
0.9617 |
| ADQ61237.1 | GT8 | 1 | 443 | 1 | 448 | 0.9481 |
0.9629 |
| A0A252CEU4 | GT8 | 1 | 439 | 1 | 448 | 0.9458 |
0.9668 |
| A0A3G9J7U1 | GT8 | 1 | 441 | 1 | 440 | 0.9447 |
0.9561 |
| A0A7T2RSN3 | GT8 | 1 | 442 | 1 | 440 | 0.9415 |
0.9544 |
| A0A7D7G947 | GT8 | 1 | 439 | 1 | 437 | 0.9408 |
0.9567 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 5e9u-assembly2.cif.gz_H | 1 | 441 | 1 | 445 | 0.9251 |
0.9432 |
| 6oyc-assembly4.cif.gz_A | 1 | 443 | 2 | 498 | 0.6872 |
0.7487 |
| 6lnw-assembly1.cif.gz_A | 1 | 443 | 2 | 492 | 0.6822 |
0.7423 |
| 5vae-assembly5.cif.gz_G | 1 | 443 | 2 | 509 | 0.6758 |
0.7447 |
| 5vae-assembly5.cif.gz_E | 1 | 443 | 2 | 509 | 0.674 |
0.7428 |
| 5vae-assembly1.cif.gz_A | 1 | 443 | 2 | 511 | 0.6685 |
0.741 |
| 7ec7-assembly1.cif.gz_A | 1 | 443 | 1 | 496 | 0.6393 |
0.6981 |
| 7ec7-assembly2.cif.gz_B | 1 | 443 | 1 | 494 | 0.6329 |
0.6899 |
| 4pqg-assembly1.cif.gz_A | 1 | 443 | 5 | 506 | 0.6073 |
0.6705 |
| 8p1x-assembly1.cif.gz_AAA | 1 | 442 | 3 | 492 | 0.5938 |
0.6475 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A0S4NND9-F1-model_v4 | 1 | 443 | 1 | 441 | 0.9892 |
0.9952 |
| AF-A0A0H2UR90-F1-model_v4 | 1 | 443 | 1 | 445 | 0.9171 |
0.9332 |
| AF-Q3S2Y1-F1-model_v4 | 1 | 443 | 1 | 442 | 0.9146 |
0.9292 |
| AF-A1C3M0-F1-model_v4 | 1 | 443 | 1 | 439 | 0.9114 |
0.9295 |
| AF-Q79T00-F1-model_v4 | 1 | 443 | 1 | 447 | 0.9103 |
0.9306 |
| AF-Q9AET9-F1-model_v4 | 1 | 443 | 2 | 523 | 0.6654 |
0.7419 |
| AF-Q2FUW3-F1-model_v4 | 1 | 443 | 2 | 513 | 0.6157 |
0.6808 |
| AF-A0A0H2WWV6-F1-model_v4 | 1 | 443 | 3 | 493 | 0.6033 |
0.6572 |
| AF-Q3S2Y2-F1-model_v4 | 1 | 443 | 2 | 503 | 0.5986 |
0.6619 |
| AF-A0A0H2URG7-F1-model_v4 | 1 | 443 | 1 | 503 | 0.5973 |
0.6593 |