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Cluster: HRGMv2_2495_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2495_2 HRGMv2_2495_2_78 76952 80155 - GT4
NULL(UNKNOWN) HRGMv2_2495_2 HRGMv2_2495_2_79 80200 81831 - NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_2495_2 HRGMv2_2495_2_80 81824 82378 - Glyphos_transf
CAZyme HRGMv2_2495_2 HRGMv2_2495_2_81 82391 85282 - GT2
NULL(UNKNOWN) HRGMv2_2495_2 HRGMv2_2495_2_82 85263 86693 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2495_2 HRGMv2_2495_2_83 86715 87524 - 3.A.1.104.1
CAZyme HRGMv2_2495_2 HRGMv2_2495_2_84 87524 88924 - CBM50
TC HRGMv2_2495_2 HRGMv2_2495_2_85 88921 89343 - 1.A.1.17.2
Gene ID: HRGMv2_2495_2_78
Type: CAZyme
Location: 76952 - 80155 (-)
Gene ID: HRGMv2_2495_2_79
Type:
Location: 80200 - 81831 (-)
Gene ID: HRGMv2_2495_2_80
Type: pfam
Location: 81824 - 82378 (-)
Gene ID: HRGMv2_2495_2_81
Type: CAZyme
Location: 82391 - 85282 (-)
Gene ID: HRGMv2_2495_2_82
Type:
Location: 85263 - 86693 (-)
Gene ID: HRGMv2_2495_2_83
Type: TC
Location: 86715 - 87524 (-)
Gene ID: HRGMv2_2495_2_84
Type: CAZyme
Location: 87524 - 88924 (-)
Gene ID: HRGMv2_2495_2_85
Type: TC
Location: 88921 - 89343 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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