PROTEIN: HRGMv2_2495_2_79
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Protein File & Metadata
Source:
HRGMv2_2495_2_79.pdb
Genome ID:
Protein ID:
HRGMv2_2495_2_79
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Protein Sequence
MIKVLSFGCP ATKDILDYNP FNNNRNYSLT YHKGYQAIPE LNLLLDEIVP DSTNVVLFDF 60 VSEAMFGTVY QNEKVTTRNF WIKNWGSEQV YTSTDFEATF GIWKKEVAKF IQYFLEKNIV 120 LVLNSFRFSP EMVIDNENPQ PTSKEYPTIE KQEYYNQFLQ KAEKYVEEKF PQVKIIKFNQ 180 SSKVEKNHPI KAYSFYLNED YYLDSFVQFE TLIKERFLKD VTDYNHVTSE EEIYFQMGKK 240 NYSFLIQNEF EKTDNMLVTA WKKNDSVERK ILNESALGDY ILDGKYGNTY RFIPRKSFFR 300 KELKEFITAS GNKIFFTDRR DEVRMKSETS KKIVFYFMPI SGGVDWRSAN AMNRLMPYYF 360 KNLSRSLIKN TIIIRIADIN GVRGSGYTNS YNYENYESDL SEFIEEMILR YIVNRKDVVL 420 YGVSKGGAGG LFYAAKHNLN SVTVDPLISK NYSINYENDT YLFHKISKDL DLVPIINEKL 480 EFLPAHNYVI GNHYVKETWD EILRLKGVQI FDIDDETVKI HRDISPNCVP EQLMLINRLL 540 LNI 543
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-C1H7V3-F1-model_v4 | 80 | 543 | 34 | 805 | 0.3849 |
0.5332 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| K0DBX3 | GT101 | 58 | 543 | 37 | 587 | 0.5437 |
0.6879 |
| AF-A0A2L0UGW9-F1-model_v4 | GT4 | 10 | 543 | 252 | 984 | 0.4755 |
0.6275 |
| AF-A0A380YKU1-F1-model_v4 | GH43_10 | 1 | 542 | 22 | 797 | 0.4039 |
0.4879 |
| AF-A0A7T4X2W8-F1-model_v4 | PL0 | 36 | 543 | 265 | 805 | 0.399 |
0.5336 |
| WHY33820.1 | PL0 | 31 | 543 | 267 | 795 | 0.3968 |
0.5186 |
| AF-A0A0B4SBZ3-F1-model_v4 | PL0 | 43 | 543 | 44 | 797 | 0.3891 |
0.5216 |
| AF-M5D660-F1-model_v4 | PL0 | 37 | 542 | 225 | 839 | 0.3863 |
0.5025 |
| AF-A0A7G7FR21-F1-model_v4 | PL0 | 110 | 543 | 271 | 806 | 0.3856 |
0.5902 |
| AF-A0A5B8Q5V1-F1-model_v4 | PL0 | 110 | 543 | 270 | 806 | 0.384 |
0.5849 |
| AF-A0A806TDM0-F1-model_v4 | PL0 | 108 | 543 | 269 | 806 | 0.3835 |
0.5811 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| K0DBX3 | GT101 | 58 | 543 | 37 | 587 | 0.5437 |
0.6879 |
| A0A2L0UGW9 | GT4 | 10 | 543 | 252 | 984 | 0.4755 |
0.6275 |
| A0A380YKU1 | GH43_10 | 1 | 542 | 22 | 797 | 0.4039 |
0.4879 |
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-B0Y6C5-F1-model_v4 | 64 | 543 | 2 | 751 | 0.3923 |
0.5177 |
| AF-Q4WPH9-F1-model_v4 | 63 | 543 | 3 | 751 | 0.3923 |
0.5172 |