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Cluster: HRGMv2_2488_CGC21

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2488_16 HRGMv2_2488_16_33 28855 30147 + 3.A.1.1.20
TC HRGMv2_2488_16 HRGMv2_2488_16_34 30168 31052 + 3.A.1.1.20
TC HRGMv2_2488_16 HRGMv2_2488_16_35 31045 31902 + 3.A.1.1.20
CAZyme HRGMv2_2488_16 HRGMv2_2488_16_36 31902 33194 + GH32
TC HRGMv2_2488_16 HRGMv2_2488_16_37 33209 34315 + 3.A.1.1.20
CAZyme HRGMv2_2488_16 HRGMv2_2488_16_38 34438 35331 + GH13_18
NULL(UNKNOWN) HRGMv2_2488_16 HRGMv2_2488_16_39 35324 35881 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2488_16 HRGMv2_2488_16_40 36900 39587 + 3.A.3.4.1
Gene ID: HRGMv2_2488_16_33
Type: TC
Location: 28855 - 30147 (+)
Gene ID: HRGMv2_2488_16_34
Type: TC
Location: 30168 - 31052 (+)
Gene ID: HRGMv2_2488_16_35
Type: TC
Location: 31045 - 31902 (+)
Gene ID: HRGMv2_2488_16_36
Type: CAZyme
Location: 31902 - 33194 (+)
Gene ID: HRGMv2_2488_16_37
Type: TC
Location: 33209 - 34315 (+)
Gene ID: HRGMv2_2488_16_38
Type: CAZyme
Location: 34438 - 35331 (+)
Gene ID: HRGMv2_2488_16_39
Type:
Location: 35324 - 35881 (+)
Gene ID: HRGMv2_2488_16_40
Type: TC
Location: 36900 - 39587 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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