PROTEIN: HRGMv2_2488_16_39
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Protein File & Metadata
Source:
HRGMv2_2488_16_39.pdb
Genome ID:
Protein ID:
HRGMv2_2488_16_39
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Protein Sequence
MVDAKDVLTD DQIDYTTNKL YKIGANVKKK YSSAEYHNLD IYQINTTYYS ALGNDDKKYF 60 LARLLQIFAP GIPQIYYVGL LAGENDIQLL EKTKEGRDIN RHYYELDEIE EQVQRPVVKS 120 LIKLLEFRNS VPAFDLDGSI KVETPSEHEI VITRMSKAKT DVASAKVDFQ NLTYQVKYND 180 QVFGF 185
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q8CWP4-F1-model_v4 | 1 | 185 | 296 | 480 | 0.6763 |
0.9837 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A3S8SBM3-F1-model_v4 | GH13_18 | 8 | 185 | 2 | 176 | 0.9337 |
0.9734 |
| AF-A0A0U2KDH8-F1-model_v4 | GH13_18 | 1 | 185 | 179 | 363 | 0.7335 |
0.9797 |
| AF-F0K3C4-F1-model_v4 | GH13_18 | 1 | 185 | 194 | 378 | 0.725 |
0.9813 |
| AF-A0A6P1Q4X5-F1-model_v4 | GH13_18 | 17 | 181 | 1 | 208 | 0.7099 |
0.8593 |
| AF-Q6YPK2-F1-model_v4 | GH13_18 | 1 | 185 | 219 | 402 | 0.7025 |
0.9761 |
| AF-D2ADV1-F1-model_v4 | GH13_18 | 44 | 185 | 1 | 157 | 0.6834 |
0.8819 |
| AF-A0A249NLM4-F1-model_v4 | GH13_18 | 1 | 185 | 289 | 473 | 0.6774 |
0.9814 |
| AF-A0A0H2ZLN9-F1-model_v4 | GH13_18 | 1 | 185 | 296 | 480 | 0.6774 |
0.9851 |
| AF-A0A7H9FLQ3-F1-model_v4 | GH13_18 | 1 | 185 | 296 | 480 | 0.6772 |
0.9848 |
| AF-A0A1B1ID04-F1-model_v4 | GH13_18 | 1 | 185 | 296 | 480 | 0.6768 |
0.9844 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A6P1Q4X5 | GH13_18 | 17 | 181 | 1 | 208 | 0.7099 |
0.8593 |
| A0A1G9MD83 | GH13_18 | 1 | 185 | 349 | 533 | 0.6571 |
0.9835 |
| A0A5K7ZNT6 | GH13_18 | 1 | 185 | 296 | 482 | 0.641 |
0.9353 |
| A0A9X5G3Z2 | GH13_18 | 1 | 185 | 295 | 482 | 0.6274 |
0.9195 |
| A0A975DDS6 | GH13_18 | 1 | 185 | 295 | 497 | 0.6219 |
0.9186 |
| A0A087DDP8 | GH13_18 | 1 | 185 | 293 | 502 | 0.6196 |
0.9181 |
| F0RRL2 | GH13_18 | 1 | 184 | 297 | 483 | 0.6178 |
0.9069 |
| UUI76716.1 | GH13_18 | 1 | 185 | 304 | 501 | 0.6172 |
0.9163 |
| BDO42938.1 | GH13_18 | 1 | 185 | 296 | 487 | 0.6146 |
0.9007 |
| WHP16380.1 | GH13_18 | 1 | 185 | 299 | 497 | 0.6066 |
0.8977 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 7qqi-assembly1.cif.gz_A | 1 | 185 | 297 | 481 | 0.6524 |
0.9508 |
| 7qqj-assembly2.cif.gz_B | 1 | 181 | 296 | 472 | 0.637 |
0.9656 |
| 7qqj-assembly1.cif.gz_A | 1 | 181 | 296 | 469 | 0.6257 |
0.9622 |
| 1r7a-assembly1.cif.gz_A | 1 | 185 | 294 | 500 | 0.6126 |
0.9068 |
| 2gdu-assembly1.cif.gz_B | 1 | 185 | 294 | 500 | 0.6124 |
0.9066 |
| 7xdr-assembly3.cif.gz_O | 1 | 185 | 293 | 480 | 0.6045 |
0.8813 |
| 5man-assembly1.cif.gz_B | 1 | 185 | 294 | 500 | 0.5919 |
0.8758 |
| 5mb2-assembly1.cif.gz_B | 1 | 185 | 294 | 500 | 0.5918 |
0.8759 |
| 6s9v-assembly2.cif.gz_B | 1 | 185 | 304 | 492 | 0.5916 |
0.869 |
| 6s9v-assembly1.cif.gz_A | 1 | 185 | 308 | 490 | 0.5897 |
0.8745 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P10249-F1-model_v4 | 1 | 185 | 296 | 480 | 0.6755 |
0.9831 |
| AF-Q59495-F1-model_v4 | 1 | 185 | 299 | 487 | 0.6678 |
0.9772 |
| AF-P33910-F1-model_v4 | 1 | 185 | 295 | 482 | 0.6199 |
0.909 |
| AF-A0ZZH6-F1-model_v4 | 1 | 185 | 293 | 500 | 0.6135 |
0.908 |
| AF-E4PMA5-F1-model_v4 | 1 | 185 | 293 | 480 | 0.6029 |
0.8792 |
| AF-D9TT09-F1-model_v4 | 1 | 185 | 300 | 488 | 0.5968 |
0.8744 |
| AF-A0A6C7EEG6-F1-model_v4 | 1 | 185 | 331 | 522 | 0.5757 |
0.8602 |