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Cluster: HRGMv2_2460_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2460_21 HRGMv2_2460_21_6 4727 6628 - 1.C.39.4.5
TC HRGMv2_2460_21 HRGMv2_2460_21_7 6812 7423 - 2.A.95.1.3
pfam HRGMv2_2460_21 HRGMv2_2460_21_8 7442 8563 - NAD_synthase | tRNA_Me_trans | tRNA_Me_trans_C | tRNA_Me_trans_M
NULL(UNKNOWN) HRGMv2_2460_21 HRGMv2_2460_21_9 8707 10416 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_2460_21 HRGMv2_2460_21_10 10518 11201 - GH23
CAZyme HRGMv2_2460_21 HRGMv2_2460_21_11 11384 11974 - CBM50
TC HRGMv2_2460_21 HRGMv2_2460_21_12 12270 13064 - 3.A.1.25.6
TC HRGMv2_2460_21 HRGMv2_2460_21_13 13057 13899 - 3.A.1.25.6
TC HRGMv2_2460_21 HRGMv2_2460_21_14 13875 14705 - 3.A.1.25.6
TC HRGMv2_2460_21 HRGMv2_2460_21_15 14718 15260 - 4.F.1.1.7
Gene ID: HRGMv2_2460_21_6
Type: TC
Location: 4727 - 6628 (-)
Gene ID: HRGMv2_2460_21_7
Type: TC
Location: 6812 - 7423 (-)
Gene ID: HRGMv2_2460_21_8
Type: pfam
Location: 7442 - 8563 (-)
Gene ID: HRGMv2_2460_21_9
Type:
Location: 8707 - 10416 (-)
Gene ID: HRGMv2_2460_21_10
Type: CAZyme
Location: 10518 - 11201 (-)
Gene ID: HRGMv2_2460_21_11
Type: CAZyme
Location: 11384 - 11974 (-)
Gene ID: HRGMv2_2460_21_12
Type: TC
Location: 12270 - 13064 (-)
Gene ID: HRGMv2_2460_21_13
Type: TC
Location: 13057 - 13899 (-)
Gene ID: HRGMv2_2460_21_14
Type: TC
Location: 13875 - 14705 (-)
Gene ID: HRGMv2_2460_21_15
Type: TC
Location: 14718 - 15260 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota
→
Class
Bacilli
→
Order
Lactobacillales
→
Family
Streptococcaceae
→
Genus
Streptococcus
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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