PROTEIN: HRGMv2_2460_21_9
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Protein File & Metadata
Source:
HRGMv2_2460_21_9.pdb
Genome ID:
Protein ID:
HRGMv2_2460_21_9
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Detailed structural information will appear here after analysis...
Protein Sequence
MKQFFKSKEK LWVSLIIIAF AVLLVTPQLF TRKVILGSDS IFHYNRFYEA AMQLKNGNFS 60 YFLSLYGFQQ SGRIVNALYG PFFAYLQGGL ILISGTWFRY QIVSRILLHI LAESSMYALL 120 KQCKVKTSIA LSLGLLYATT FSIQYWTMRQ GFSSWGAALL PFCFIPAIHN IFYQKVEPIR 180 LALSMALIFQ VHVLSALMLV MMYIPFYLYT FVKVSVTKKK ETLVQVFIAV TLFLLLTVNV 240 WLVLLYLRGT NHLLDPFINR EIGKNGIDGT ARYWLYTPIS LMVLLVLQFA YAILNWKKLA 300 KWKKILHFIY FIFFFLSTGL FPWQYLVENG NAFAELIQFP FRFFVPATIM LLAITGLTVT 360 RFVNWRKSIA VLLFAFAGIG LIQNMMDTTE RVKTAAQDGE LISIVKHTYV EGDYQTISLT 420 MDDSDLSQFL NLVVKPTPDY VPIYGTIGKQ NTYDLYYKNV VKNQSAEKRL ENGYLVLTWQ 480 AAEGEELNLP IVVYRDSILT LNGQELNKAD YRLSTIGTPI VSSQKGQNKL VLSYQEPGWL 540 VIAVLIPIIV WGLISLQWVY TKINIKKVA 569
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A1S8IUA0-F1-model_v4 | 1 | 569 | 5 | 566 | 0.953 |
0.9686 |
| AF-A0A133CH43-F1-model_v4 | 4 | 564 | 1 | 544 | 0.8135 |
0.8481 |
| AF-A0A5P3FT45-F1-model_v4 | 3 | 569 | 1 | 540 | 0.8093 |
0.8466 |
| AF-A0A133CFT8-F1-model_v4 | 4 | 565 | 1 | 535 | 0.7992 |
0.8475 |
| AF-A0A133CH37-F1-model_v4 | 102 | 568 | 1 | 451 | 0.7169 |
0.8274 |
| AF-K0EMA3-F1-model_v4 | 1 | 569 | 34 | 760 | 0.6253 |
0.727 |
| AF-K0EVD5-F1-model_v4 | 1 | 568 | 3 | 725 | 0.6242 |
0.7209 |
| AF-K0EUF9-F1-model_v4 | 6 | 568 | 1 | 722 | 0.6213 |
0.72 |
| AF-K0EV20-F1-model_v4 | 17 | 568 | 1 | 706 | 0.6108 |
0.7135 |
| AF-A0A132Z547-F1-model_v4 | 1 | 569 | 3 | 872 | 0.5986 |
0.7366 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A160SZH0-F1-model_v4 | GT2 | 2 | 569 | 2 | 599 | 0.6462 |
0.7585 |
| AF-F2LXI8-F1-model_v4 | GT83 | 2 | 528 | 4 | 428 | 0.6295 |
0.7366 |
| AF-A0A858ZP41-F1-model_v4 | GT83 | 1 | 528 | 7 | 505 | 0.6195 |
0.6796 |
| AF-A0A1S6H5E4-F1-model_v4 | GT39 | 2 | 398 | 1 | 402 | 0.6176 |
0.7524 |
| AF-A0A5S9F4H0-F1-model_v4 | GT83 | 5 | 479 | 1 | 448 | 0.6117 |
0.7248 |
| AF-D5EJZ3-F1-model_v4 | GT83 | 1 | 496 | 13 | 514 | 0.6075 |
0.6754 |
| AF-F8E835-F1-model_v4 | GT83 | 1 | 480 | 1 | 495 | 0.6073 |
0.708 |
| AF-A0A7S7TT57-F1-model_v4 | GT39 | 1 | 396 | 9 | 421 | 0.607 |
0.7599 |
| A0A363RFN2 | GT83 | 2 | 529 | 5 | 510 | 0.607 |
0.66 |
| AF-A0A7U4L531-F1-model_v4 | GT83 | 1 | 528 | 1 | 495 | 0.6067 |
0.6654 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A160SZH0 | GT2 | 2 | 569 | 2 | 599 | 0.6462 |
0.7585 |
| F2LXI8 | GT83 | 2 | 528 | 4 | 428 | 0.6295 |
0.7366 |
| A0A1B3X237 | GT83 | 5 | 465 | 1 | 437 | 0.6267 |
0.7586 |
| A0A518B1V8 | GT83 | 1 | 533 | 9 | 494 | 0.6261 |
0.6958 |
| A0A0K1PEQ4 | GT83 | 1 | 479 | 1 | 438 | 0.6223 |
0.7548 |
| A0A1Y0HP85 | GT83 | 10 | 461 | 5 | 418 | 0.6191 |
0.7375 |
| A0A1S6H5E4 | GT39 | 2 | 398 | 1 | 402 | 0.6176 |
0.7524 |
| I4BYW5 | GT83 | 1 | 466 | 1 | 447 | 0.6175 |
0.7384 |
| C9LV70 | GT83 | 5 | 464 | 1 | 444 | 0.616 |
0.7399 |
| A0A1V0HVL7 | GT83 | 1 | 531 | 4 | 491 | 0.6148 |
0.6796 |
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P42377-F1-model_v4 | 1 | 569 | 9 | 611 | 0.7527 |
0.797 |
| AF-Q1MLH5-F1-model_v4 | 8 | 520 | 2 | 473 | 0.6024 |
0.6741 |
| AF-B7LM74-F1-model_v4 | 5 | 481 | 1 | 510 | 0.5848 |
0.6913 |
| AF-P96419-F1-model_v4 | 5 | 565 | 2 | 1282 | 0.5037 |
0.7255 |