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Cluster: HRGMv2_2459_CGC24

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2459_15 HRGMv2_2459_15_8 6019 7920 - 1.C.39.4.5
TC HRGMv2_2459_15 HRGMv2_2459_15_9 8104 8733 - 2.A.95.1.3
pfam HRGMv2_2459_15 HRGMv2_2459_15_10 8734 9855 - NAD_synthase | tRNA_Me_trans | tRNA_Me_trans_C | tRNA_Me_trans_M
NULL(UNKNOWN) HRGMv2_2459_15 HRGMv2_2459_15_11 10000 11709 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_2459_15 HRGMv2_2459_15_12 11854 12537 - GH23
CAZyme HRGMv2_2459_15 HRGMv2_2459_15_13 12692 13273 - CBM50
TC HRGMv2_2459_15 HRGMv2_2459_15_14 13572 14366 - 3.A.1.25.6
TC HRGMv2_2459_15 HRGMv2_2459_15_15 14359 15201 - 3.A.1.25.6
TC HRGMv2_2459_15 HRGMv2_2459_15_16 15177 16007 - 3.A.1.25.6
TC HRGMv2_2459_15 HRGMv2_2459_15_17 16020 16562 - 4.F.1.1.7
Gene ID: HRGMv2_2459_15_8
Type: TC
Location: 6019 - 7920 (-)
Gene ID: HRGMv2_2459_15_9
Type: TC
Location: 8104 - 8733 (-)
Gene ID: HRGMv2_2459_15_10
Type: pfam
Location: 8734 - 9855 (-)
Gene ID: HRGMv2_2459_15_11
Type:
Location: 10000 - 11709 (-)
Gene ID: HRGMv2_2459_15_12
Type: CAZyme
Location: 11854 - 12537 (-)
Gene ID: HRGMv2_2459_15_13
Type: CAZyme
Location: 12692 - 13273 (-)
Gene ID: HRGMv2_2459_15_14
Type: TC
Location: 13572 - 14366 (-)
Gene ID: HRGMv2_2459_15_15
Type: TC
Location: 14359 - 15201 (-)
Gene ID: HRGMv2_2459_15_16
Type: TC
Location: 15177 - 16007 (-)
Gene ID: HRGMv2_2459_15_17
Type: TC
Location: 16020 - 16562 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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