PROTEIN: HRGMv2_2459_15_11
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Protein File & Metadata
Source:
HRGMv2_2459_15_11.pdb
Genome ID:
Protein ID:
HRGMv2_2459_15_11
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Protein Sequence
MKQIFKSRER LWVSLFIISF AILLVTPQLF TRKVILGSDS IFHYNRFYEA AMQLKNGNFS 60 YFLSLYGFQQ SGRIVNALYG PFFAYLQGGL ILISGTWFRY QIVSRVLLHI LAESSMYALL 120 KQCKVKTSIA LSLGLLYATT FSIQYWTMRQ GFSSWGAALL PYCFIPAIHY VFYQRVDQVR 180 LALSMALIFQ IHVLSALMLA MMYLPFYLYT FVKATTSKKK ETILKVLIAV ILFLLLTVNV 240 WGVLLYLRGA NHLLDPFINR EIGKNGIDGT ARYWLYTPIS LMVLLILQFI YAIVNWKKLA 300 RWKRILHFIY FVFFFLSTGL FPWQYLVENG NTFAELIQFP FRFFVPATIL LLAITGLTVT 360 RFVNWRKSIA VLLFAFAGVG LIQNIMDTTD RVKSAAQDGE LISIVKHTYV EGDYQTISLT 420 MNDSDLSQFL NLVVKSTPDY VPIYGTIGKQ NTYDLYYENI VMNQRTEKLI KDNYLVLTWQ 480 ADEGEELNLP IVVYKDSILT LNGKELDKDD YNLSTIGTPT VSSQEGKNKL ELRYQEPEWL 540 FVAISAPLVV LGTIGLQWLY TKISIKKVA 569
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A1S8IUA0-F1-model_v4 | 1 | 569 | 5 | 566 | 0.9516 |
0.9673 |
| AF-A0A133CH43-F1-model_v4 | 4 | 564 | 1 | 544 | 0.8137 |
0.8483 |
| AF-A0A5P3FT45-F1-model_v4 | 3 | 569 | 1 | 540 | 0.8093 |
0.8464 |
| AF-A0A133CFT8-F1-model_v4 | 4 | 565 | 1 | 535 | 0.7995 |
0.8476 |
| AF-A0A133CH37-F1-model_v4 | 102 | 569 | 1 | 452 | 0.7185 |
0.8273 |
| AF-K0EMA3-F1-model_v4 | 1 | 569 | 34 | 760 | 0.6262 |
0.7283 |
| AF-K0EVD5-F1-model_v4 | 1 | 569 | 3 | 727 | 0.6261 |
0.722 |
| AF-K0EUF9-F1-model_v4 | 6 | 566 | 1 | 721 | 0.6228 |
0.7239 |
| AF-K0EV20-F1-model_v4 | 17 | 569 | 1 | 706 | 0.6143 |
0.7171 |
| AF-Q8DMX0-F1-model_v4 | 1 | 561 | 2 | 847 | 0.6 |
0.736 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A160SZH0-F1-model_v4 | GT2 | 2 | 569 | 2 | 599 | 0.6484 |
0.7611 |
| AF-A0A518N6I7-F1-model_v4 | GT83 | 1 | 486 | 2 | 474 | 0.6259 |
0.7158 |
| AF-A0A1P8YE20-F1-model_v4 | GT83 | 1 | 467 | 4 | 441 | 0.6236 |
0.7286 |
| AF-F2I0U0-F1-model_v4 | GT0 | 5 | 490 | 1 | 427 | 0.6234 |
0.7355 |
| AF-A0A858ZP41-F1-model_v4 | GT83 | 1 | 528 | 7 | 505 | 0.6213 |
0.6809 |
| A0A8D4UV30 | GT83 | 5 | 465 | 3 | 442 | 0.6191 |
0.7496 |
| AF-A0A1S6H5E4-F1-model_v4 | GT39 | 2 | 398 | 1 | 402 | 0.6174 |
0.752 |
| A0A8D5JSU7 | GT83 | 1 | 530 | 1 | 491 | 0.6154 |
0.677 |
| AF-A0A2U8FMR6-F1-model_v4 | GT83 | 2 | 534 | 8 | 488 | 0.6151 |
0.6869 |
| AF-A0A1B1ZLM5-F1-model_v4 | GT85 | 1 | 535 | 20 | 640 | 0.6147 |
0.7001 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A160SZH0 | GT2 | 2 | 569 | 2 | 599 | 0.6484 |
0.7611 |
| A0A518B1V8 | GT83 | 1 | 533 | 9 | 494 | 0.6292 |
0.6992 |
| A0A1B3X237 | GT83 | 5 | 465 | 1 | 437 | 0.6288 |
0.7613 |
| A0A2I1TER0 | GT83 | 5 | 480 | 5 | 448 | 0.6237 |
0.7438 |
| A0A0K1PEQ4 | GT83 | 1 | 479 | 1 | 438 | 0.6234 |
0.756 |
| A0A1Y0HP85 | GT83 | 10 | 469 | 5 | 423 | 0.621 |
0.732 |
| I4BYW5 | GT83 | 1 | 466 | 1 | 447 | 0.6198 |
0.7412 |
| A0A8D4UV30 | GT83 | 5 | 465 | 3 | 442 | 0.6191 |
0.7496 |
| C9LV70 | GT83 | 2 | 464 | 1 | 444 | 0.6189 |
0.7436 |
| A0A1S6H5E4 | GT39 | 2 | 398 | 1 | 402 | 0.6174 |
0.752 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 8if8-assembly1.cif.gz_B | 1 | 531 | 67 | 619 | 0.6016 |
0.6835 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P42377-F1-model_v4 | 1 | 569 | 9 | 611 | 0.7558 |
0.8 |
| AF-Q1MLH5-F1-model_v4 | 8 | 520 | 2 | 473 | 0.604 |
0.676 |
| AF-Q1MJ96-F1-model_v4 | 8 | 529 | 7 | 499 | 0.6 |
0.6623 |
| AF-P9WN02-F1-model_v4 | 1 | 530 | 86 | 642 | 0.5946 |
0.6865 |
| AF-Q8D339-F1-model_v4 | 1 | 481 | 2 | 521 | 0.5839 |
0.6916 |
| AF-B7LM74-F1-model_v4 | 5 | 481 | 1 | 510 | 0.5838 |
0.6935 |
| AF-Q8VDB2-F1-model_v4 | 1 | 464 | 2 | 426 | 0.5642 |
0.7007 |
| AF-P39007-F1-model_v4 | 1 | 464 | 7 | 569 | 0.5281 |
0.7153 |