Cluster: HRGMv2_2459_CGC12
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 4
- Substrate:
- Genome ID: HRGMv2_2459
- CGC Family ID: CGCFAM_04974
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2459_5 | HRGMv2_2459_5_104 | 86137 | 87609 | - | GT4 |
| NULL(UNKNOWN) | HRGMv2_2459_5 | HRGMv2_2459_5_105 | 87606 | 88880 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_2459_5 | HRGMv2_2459_5_106 | 88931 | 89812 | - | GT2 |
| CAZyme | HRGMv2_2459_5 | HRGMv2_2459_5_107 | 89816 | 91024 | - | GT8 |
| CAZyme | HRGMv2_2459_5 | HRGMv2_2459_5_108 | 91313 | 92752 | - | GH1 |
| pfam | HRGMv2_2459_5 | HRGMv2_2459_5_109 | 92874 | 93383 | - | PMSR |
| TC | HRGMv2_2459_5 | HRGMv2_2459_5_110 | 93395 | 94243 | - | 3.A.1.24.6 |
Gene ID: HRGMv2_2459_5_104
Type: CAZyme
Location: 86137 - 87609 (-)
Type: CAZyme
Location: 86137 - 87609 (-)
Gene ID: HRGMv2_2459_5_105
Type:
Location: 87606 - 88880 (-)
Type:
Location: 87606 - 88880 (-)
Gene ID: HRGMv2_2459_5_106
Type: CAZyme
Location: 88931 - 89812 (-)
Type: CAZyme
Location: 88931 - 89812 (-)
Gene ID: HRGMv2_2459_5_107
Type: CAZyme
Location: 89816 - 91024 (-)
Type: CAZyme
Location: 89816 - 91024 (-)
Gene ID: HRGMv2_2459_5_108
Type: CAZyme
Location: 91313 - 92752 (-)
Type: CAZyme
Location: 91313 - 92752 (-)
Gene ID: HRGMv2_2459_5_109
Type: pfam
Location: 92874 - 93383 (-)
Type: pfam
Location: 92874 - 93383 (-)
Gene ID: HRGMv2_2459_5_110
Type: TC
Location: 93395 - 94243 (-)
Type: TC
Location: 93395 - 94243 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Streptococcaceae
Genus
Streptococcus
Species
Streptococcus sp000187445
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.