PROTEIN: HRGMv2_2459_5_105
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Protein File & Metadata
Source:
HRGMv2_2459_5_105.pdb
Genome ID:
Protein ID:
HRGMv2_2459_5_105
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Protein Sequence
MLIIAQETSQ ATDKLRRLLD SLGMKSRVFY TNFETDVDGN TISLASSFSY SSEDDYQGKP 60 LFFNDLSVPL YWELWTLGIT TYLFDGKNRR ANIIFRENVR ERTVKQVEWF GQGEKVVAID 120 DYNRYGWRTK QRLLDDEGQA LMDIYFNRAQ EEVLLHYIQE DYLIHQGSVG RDTIFSGKDD 180 VIKFVLGQIL KSDETIICMD PNLLPLLQAE RLVYCSGSHD NLEYLQNQVS HILITNYYPQ 240 EEHRSGLIYL AGAEQEGNQP FVAQAMVMTA SENIEGLAGL VDKFPDIDFH IAALTSMGPK 300 LTCLEEKTNV HLYPGISRKK YRELLRKCSI YLDLNYGSEV SDVTLEAIAN EQLLYGLAST 360 VHRQYYKALP TVFASVEELG QSIRQLLQEP DVYPRALKAQ KEALKLADRA EIMAFFNQLE 420 GGQR 424
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q2FUW8-F1-model_v4 | 1 | 421 | 1 | 451 | 0.6731 |
0.7245 |
| AF-Q2G0L3-F1-model_v4 | 1 | 421 | 2 | 490 | 0.6525 |
0.7245 |
| AF-Q2G0L2-F1-model_v4 | 1 | 423 | 2 | 496 | 0.6446 |
0.7178 |
| AF-Q2FUW3-F1-model_v4 | 1 | 424 | 2 | 516 | 0.6444 |
0.7288 |
| AF-Q2FUW7-F1-model_v4 | 1 | 422 | 2 | 502 | 0.6199 |
0.6958 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A1S1DKP0 | GT8 | 1 | 424 | 1 | 427 | 0.9637 |
0.9796 |
| AF-A0A1V0H8S9-F1-model_v4 | GT8 | 1 | 424 | 1 | 427 | 0.9572 |
0.9741 |
| AF-A0A1V0GEF3-F1-model_v4 | GT8 | 1 | 424 | 1 | 427 | 0.9568 |
0.9737 |
| A0A1X1KKR5 | GT8 | 1 | 424 | 1 | 427 | 0.9116 |
0.9299 |
| AF-A0A7L6WMT6-F1-model_v4 | GT8 | 1 | 424 | 1 | 430 | 0.8934 |
0.9176 |
| AF-A0A7D4F6T2-F1-model_v4 | GT8 | 1 | 424 | 1 | 430 | 0.8917 |
0.9166 |
| AF-A0A448AE70-F1-model_v4 | GT8 | 1 | 424 | 1 | 430 | 0.885 |
0.9088 |
| A0A9X0WP12 | GT8 | 1 | 424 | 1 | 428 | 0.8822 |
0.9087 |
| AF-A0A5J6LNV6-F1-model_v4 | GT8 | 1 | 423 | 1 | 426 | 0.8583 |
0.8846 |
| AF-A0A7G9T5H4-F1-model_v4 | GT8 | 1 | 423 | 2 | 449 | 0.7858 |
0.8331 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A1S1DKP0 | GT8 | 1 | 424 | 1 | 427 | 0.9637 |
0.9796 |
| A0A1X1KKR5 | GT8 | 1 | 424 | 1 | 427 | 0.9116 |
0.9299 |
| A0A9X0WP12 | GT8 | 1 | 424 | 1 | 428 | 0.8822 |
0.9087 |
| A0A7G9T5H4 | GT8 | 1 | 423 | 2 | 449 | 0.7858 |
0.8331 |
| A0A372KJZ7 | GT8 | 1 | 421 | 1 | 438 | 0.7473 |
0.7917 |
| A1C3M0 | GT8 | 1 | 423 | 1 | 439 | 0.7444 |
0.7862 |
| S5QZV0 | GT8 | 1 | 422 | 1 | 441 | 0.7367 |
0.7825 |
| QUE54659.1 | GT8 | 1 | 421 | 1 | 442 | 0.7345 |
0.7835 |
| A0A0D4CK58 | GT8 | 1 | 423 | 1 | 447 | 0.7264 |
0.7722 |
| A0A1W7AEC0 | GT8 | 1 | 423 | 1 | 441 | 0.7242 |
0.7637 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 6lnw-assembly1.cif.gz_A | 1 | 421 | 2 | 489 | 0.7083 |
0.7868 |
| 5e9u-assembly2.cif.gz_H | 1 | 421 | 1 | 445 | 0.7044 |
0.7554 |
| 6oyc-assembly4.cif.gz_A | 1 | 421 | 2 | 498 | 0.7035 |
0.7843 |
| 5vae-assembly5.cif.gz_E | 1 | 421 | 2 | 507 | 0.7003 |
0.7877 |
| 5vae-assembly5.cif.gz_G | 1 | 421 | 2 | 507 | 0.6994 |
0.7867 |
| 5vae-assembly1.cif.gz_A | 1 | 421 | 2 | 508 | 0.6957 |
0.7869 |
| 7ec7-assembly1.cif.gz_A | 1 | 423 | 2 | 496 | 0.6665 |
0.7406 |
| 7ec7-assembly2.cif.gz_B | 1 | 423 | 2 | 494 | 0.6584 |
0.7308 |
| 4pqg-assembly1.cif.gz_A | 1 | 423 | 6 | 506 | 0.6467 |
0.7241 |
| 5vaf-assembly1.cif.gz_A | 1 | 420 | 2 | 504 | 0.645 |
0.7306 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A1C3M0-F1-model_v4 | 1 | 423 | 1 | 439 | 0.7448 |
0.7865 |
| AF-Q3S2Y1-F1-model_v4 | 1 | 422 | 1 | 442 | 0.7346 |
0.7808 |
| AF-A0A0S4NND9-F1-model_v4 | 1 | 423 | 1 | 441 | 0.7282 |
0.7709 |
| AF-A0A0H2UR90-F1-model_v4 | 1 | 422 | 1 | 445 | 0.6974 |
0.7422 |
| AF-Q9AET9-F1-model_v4 | 1 | 421 | 2 | 520 | 0.6919 |
0.7881 |
| AF-Q79T00-F1-model_v4 | 1 | 424 | 1 | 450 | 0.6884 |
0.7342 |
| AF-Q2FUW3-F1-model_v4 | 1 | 424 | 2 | 516 | 0.6444 |
0.7288 |
| AF-Q3S2Y2-F1-model_v4 | 1 | 424 | 2 | 505 | 0.6347 |
0.7103 |
| AF-Q9AET5-F1-model_v4 | 1 | 424 | 3 | 505 | 0.6298 |
0.706 |
| AF-A0A0H2WWV6-F1-model_v4 | 1 | 422 | 4 | 493 | 0.6268 |
0.6978 |