Cluster: HRGMv2_2344_CGC48
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2344
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2344_24 | HRGMv2_2344_24_34 | 33568 | 36003 | - | GH94 |
| TF | HRGMv2_2344_24 | HRGMv2_2344_24_35 | 36568 | 37581 | + | LacI |
| NULL(UNKNOWN) | HRGMv2_2344_24 | HRGMv2_2344_24_36 | 37684 | 39105 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_2344_24 | HRGMv2_2344_24_37 | 39320 | 40327 | + | 3.A.1.1.4 |
| TC | HRGMv2_2344_24 | HRGMv2_2344_24_38 | 40330 | 41205 | + | 3.A.1.1.48 |
Gene ID: HRGMv2_2344_24_34
Type: CAZyme
Location: 33568 - 36003 (-)
Type: CAZyme
Location: 33568 - 36003 (-)
Gene ID: HRGMv2_2344_24_35
Type: TF
Location: 36568 - 37581 (+)
Type: TF
Location: 36568 - 37581 (+)
Gene ID: HRGMv2_2344_24_36
Type:
Location: 37684 - 39105 (+)
Type:
Location: 37684 - 39105 (+)
Gene ID: HRGMv2_2344_24_37
Type: TC
Location: 39320 - 40327 (+)
Type: TC
Location: 39320 - 40327 (+)
Gene ID: HRGMv2_2344_24_38
Type: TC
Location: 40330 - 41205 (+)
Type: TC
Location: 40330 - 41205 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
UBA3282
Species
UBA3282 sp934401915
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.