PROTEIN: HRGMv2_2344_24_36
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Protein File & Metadata
Source:
HRGMv2_2344_24_36.pdb
Genome ID:
Protein ID:
HRGMv2_2344_24_36
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Protein Sequence
MKKKVVSVLL STAMVASLLV GCGSNSADTA APADDAAPAE TTEEAPADDA AAEEAPAEDA 60 AADTAASGDK FYIYSWNTEL QERLKFVTDA YPEVADRIEY VNVGDSAIYQ EKIDQLLQTP 120 DADDYPDMIA FEAGYIMKYT NSDYTLPVTD LGITDADLAE MYPYTITIAT DQRDGSLKGL 180 SWQSCPGAFM YRTDLAESLL GVKSPEEMQA KISTWDDFLA TAKEIKTASN DATRILSSDG 240 DIVNTFMSNK SEPWVDKDGV FHMDSAMEEY MDVYKALEQD DLTQKTTTWS DEWNAGPSTD 300 SVFGYFGCTW FLHWTIKANC GGTAVGEGTY GLWNMCQGPA PYYWGGTWLG ATANCSDTAL 360 AGQIMKALCC DTDIMTKMSE ETLDYVNNKT AMKTLSDAGK GAYDFLGGQD FIAVFSPLAD 420 KVDVSWMCAY DQKVNELLDT QVKAYANGEK DKDTAIADFK QAVADAYPGV TVE 473
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A132Z3C8-F1-model_v4 | 66 | 469 | 31 | 428 | 0.731 |
0.8374 |
| AF-A0A133CPC5-F1-model_v4 | 63 | 469 | 30 | 423 | 0.7253 |
0.8334 |
| AF-P76042-F1-model_v4 | 62 | 470 | 24 | 430 | 0.725 |
0.8158 |
| AF-K0F002-F1-model_v4 | 64 | 469 | 44 | 439 | 0.7249 |
0.8426 |
| AF-A0A133CDW9-F1-model_v4 | 64 | 471 | 40 | 444 | 0.7156 |
0.8204 |
| AF-P71619-F1-model_v4 | 66 | 471 | 34 | 429 | 0.7112 |
0.8256 |
| AF-K0F2E6-F1-model_v4 | 66 | 471 | 41 | 437 | 0.7109 |
0.8287 |
| AF-A0A132ZDH4-F1-model_v4 | 64 | 464 | 27 | 427 | 0.7084 |
0.8062 |
| AF-Q9HZ48-F1-model_v4 | 65 | 470 | 21 | 420 | 0.6509 |
0.7399 |
| AF-K0EUI4-F1-model_v4 | 66 | 472 | 18 | 436 | 0.6454 |
0.7377 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A9Q8PNJ5 | GH4 | 1 | 470 | 85 | 866 | 0.5614 |
0.7345 |
| AF-A0A1Q2TKJ3-F1-model_v4 | GH49 | 2 | 470 | 43 | 797 | 0.5479 |
0.6987 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A0M1Q963 | GH43_11 | 60 | 472 | 40 | 495 | 0.6311 |
0.7558 |
| A0A9Q8PNJ5 | GH4 | 1 | 470 | 85 | 866 | 0.5614 |
0.7345 |
| A0A1Q2TKJ3 | GH49 | 2 | 470 | 43 | 797 | 0.5479 |
0.6987 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 5ixp-assembly1.cif.gz_A | 66 | 468 | 1 | 393 | 0.8076 |
0.8953 |
| 3uor-assembly2.cif.gz_B | 66 | 472 | 1 | 389 | 0.7694 |
0.8646 |
| 6x84-assembly2.cif.gz_B | 65 | 471 | 1 | 411 | 0.7541 |
0.8315 |
| 6hus-assembly1.cif.gz_A | 59 | 473 | 10 | 428 | 0.753 |
0.8304 |
| 6wpn-assembly1.cif.gz_A | 70 | 472 | 1 | 395 | 0.7517 |
0.8346 |
| 2z8d-assembly2.cif.gz_B | 62 | 473 | 1 | 399 | 0.7491 |
0.8279 |
| 7vfq-assembly1.cif.gz_A | 66 | 473 | 1 | 394 | 0.749 |
0.8322 |
| 6wpn-assembly2.cif.gz_B | 69 | 472 | 1 | 394 | 0.7487 |
0.8326 |
| 7vfq-assembly2.cif.gz_B | 66 | 473 | 1 | 396 | 0.7481 |
0.8295 |
| 2z8d-assembly1.cif.gz_A | 63 | 473 | 1 | 401 | 0.7481 |
0.8255 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P94528-F1-model_v4 | 66 | 468 | 31 | 433 | 0.7556 |
0.8576 |
| AF-Q9KEE7-F1-model_v4 | 1 | 469 | 18 | 445 | 0.7444 |
0.8109 |
| AF-Q9K491-F1-model_v4 | 59 | 470 | 31 | 424 | 0.7276 |
0.8384 |
| AF-P76042-F1-model_v4 | 62 | 470 | 24 | 430 | 0.725 |
0.8158 |
| AF-Q578M8-F1-model_v4 | 65 | 470 | 22 | 411 | 0.7188 |
0.8238 |
| AF-O31518-F1-model_v4 | 58 | 471 | 25 | 427 | 0.6985 |
0.793 |
| AF-Q7LYW7-F1-model_v4 | 61 | 471 | 38 | 450 | 0.6979 |
0.7966 |
| AF-O32156-F1-model_v4 | 65 | 471 | 28 | 422 | 0.6941 |
0.7962 |
| AF-P59214-F1-model_v4 | 63 | 472 | 36 | 422 | 0.6918 |
0.809 |
| AF-Q8UB32-F1-model_v4 | 66 | 471 | 24 | 434 | 0.6917 |
0.787 |