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Cluster: HRGMv2_2213_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2213_3 HRGMv2_2213_3_6 5956 6765 + GT2
peptidase HRGMv2_2213_3 HRGMv2_2213_3_7 6784 10842 + C82.UNA
TC HRGMv2_2213_3 HRGMv2_2213_3_8 10915 12312 + 2.A.50.2.1
pfam HRGMv2_2213_3 HRGMv2_2213_3_9 12327 13430 + ALGX
CAZyme HRGMv2_2213_3 HRGMv2_2213_3_10 13564 14268 + GT2
pfam HRGMv2_2213_3 HRGMv2_2213_3_11 14271 14642 + DUF2304
NULL(UNKNOWN) HRGMv2_2213_3 HRGMv2_2213_3_12 14654 16027 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_2213_3 HRGMv2_2213_3_13 16032 16949 + GT2
Gene ID: HRGMv2_2213_3_6
Type: CAZyme
Location: 5956 - 6765 (+)
Gene ID: HRGMv2_2213_3_7
Type: peptidase
Location: 6784 - 10842 (+)
Gene ID: HRGMv2_2213_3_8
Type: TC
Location: 10915 - 12312 (+)
Gene ID: HRGMv2_2213_3_9
Type: pfam
Location: 12327 - 13430 (+)
Gene ID: HRGMv2_2213_3_10
Type: CAZyme
Location: 13564 - 14268 (+)
Gene ID: HRGMv2_2213_3_11
Type: pfam
Location: 14271 - 14642 (+)
Gene ID: HRGMv2_2213_3_12
Type:
Location: 14654 - 16027 (+)
Gene ID: HRGMv2_2213_3_13
Type: CAZyme
Location: 16032 - 16949 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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