PROTEIN: HRGMv2_2213_3_12
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Protein File & Metadata
Source:
HRGMv2_2213_3_12.pdb
Genome ID:
Protein ID:
HRGMv2_2213_3_12
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Protein Sequence
MNIGKNIIRV FCANFFQLIS SVVVNFFVPA VLSIDDYAVL RTYMLINTYV GFTHLGFIDG 60 MYIKYGGLGA GDVCKEEIKA EHRVFICEQL LLAFGCAAAG ICFKQTLWIL VGIGLLPINC 120 YSFHRMFFQA TGQFDKYSKV SYVYTVVYLA LNAVLAILFK CEKPWLYCAA IVVAYLLASF 180 IGEIDFGRQV RKVIACYNKA LLNNIKVGIF ILLGNLAVQM FYAIDQWFVK GTMQDTQFAY 240 YSFAVSLINM VNVLISAITV TFYNFLAQKP EHEKVANIKT LLILFGTAIS TAYFILVPII 300 SFILPKYIPA LDIIAITFST FPYIIIINAL FVNLYKVEKK EKLYMKQVVA MLGVAAVLNL 360 VAVITVNTMQ AIALATTASF VIWFYYAMRH FSFLKVSKSE FVYLSFALIW FLVCSHTFTW 420 YIGGILYVIG ICIVGGGLLH EFLHSAINIV KNKMYGW 457
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A1A7SN45-F1-model_v4 | 7 | 457 | 11 | 469 | 0.8537 |
0.8943 |
| AF-Q5FAD8-F1-model_v4 | 2 | 456 | 1 | 469 | 0.8349 |
0.8713 |
| AF-Q58467-F1-model_v4 | 1 | 457 | 1 | 507 | 0.8265 |
0.8847 |
| AF-Q57484-F1-model_v4 | 1 | 395 | 1 | 397 | 0.8215 |
0.9031 |
| AF-Q2G262-F1-model_v4 | 1 | 457 | 2 | 476 | 0.8177 |
0.8532 |
| AF-P71399-F1-model_v4 | 1 | 393 | 1 | 396 | 0.8152 |
0.8981 |
| AF-Q9I1M8-F1-model_v4 | 3 | 452 | 1 | 469 | 0.8115 |
0.8526 |
| AF-A0A0H3GSJ3-F1-model_v4 | 1 | 456 | 1 | 477 | 0.8015 |
0.8401 |
| AF-Q8DPI1-F1-model_v4 | 1 | 454 | 1 | 488 | 0.8002 |
0.8557 |
| AF-H9L497-F1-model_v4 | 1 | 456 | 1 | 481 | 0.7962 |
0.8433 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A160T089-F1-model_v4 | GT4 | 1 | 457 | 3 | 509 | 0.7667 |
0.8304 |
| AF-A0A160T2N7-F1-model_v4 | GT28 | 1 | 457 | 39 | 545 | 0.7558 |
0.8364 |
| QNU38870.1 | GT4 | 2 | 456 | 1 | 474 | 0.7235 |
0.8396 |
| AF-F9ZKY1-F1-model_v4 | GT2 | 1 | 457 | 17 | 520 | 0.6578 |
0.8623 |
| AF-A1R6N5-F1-model_v4 | GT2 | 1 | 457 | 7 | 848 | 0.6486 |
0.8489 |
| AF-A0A3T0RPT8-F1-model_v4 | GT4 | 1 | 457 | 3 | 566 | 0.6442 |
0.843 |
| A0A836MCF6 | GT100 | 1 | 395 | 1 | 398 | 0.6423 |
0.9041 |
| AF-A0A5Q0NSF2-F1-model_v4 | GT2 | 1 | 457 | 3 | 844 | 0.6422 |
0.8481 |
| A0A0C5BEZ8 | GT4 | 1 | 456 | 1 | 894 | 0.6396 |
0.8533 |
| A0A0J6W0G8 | GH16_3 | 1 | 418 | 19 | 467 | 0.6379 |
0.8476 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A160T089 | GT4 | 1 | 457 | 3 | 509 | 0.7667 |
0.8304 |
| A0A160T2N7 | GT28 | 1 | 457 | 39 | 545 | 0.7558 |
0.8364 |
| QNU38870.1 | GT4 | 2 | 456 | 1 | 474 | 0.7235 |
0.8396 |
| F9ZKY1 | GT2 | 1 | 457 | 17 | 520 | 0.6578 |
0.8623 |
| A0A3T0RPT8 | GT4 | 1 | 457 | 3 | 566 | 0.6442 |
0.843 |
| A0A836MCF6 | GT100 | 1 | 395 | 1 | 398 | 0.6423 |
0.9041 |
| A0A5Q0NSF2 | GT2 | 1 | 457 | 3 | 844 | 0.6422 |
0.8481 |
| A0A0C5BEZ8 | GT4 | 1 | 456 | 1 | 894 | 0.6396 |
0.8533 |
| A0A0J6W0G8 | GH16_3 | 1 | 418 | 19 | 467 | 0.6379 |
0.8476 |
| A0A3T0K5S7 | GT2 | 1 | 457 | 3 | 794 | 0.6368 |
0.8279 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 6nc6-assembly2.cif.gz_B | 7 | 448 | 1 | 461 | 0.7715 |
0.8196 |
| 7waw-assembly1.cif.gz_A | 8 | 450 | 1 | 496 | 0.7366 |
0.8083 |
| 7wag-assembly1.cif.gz_A | 4 | 457 | 4 | 514 | 0.7076 |
0.7786 |
| 4mlb-assembly1.cif.gz_C | 1 | 392 | 5 | 440 | 0.6447 |
0.7607 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q58467-F1-model_v4 | 1 | 457 | 1 | 507 | 0.8265 |
0.8847 |
| AF-Q9CNC5-F1-model_v4 | 1 | 394 | 1 | 397 | 0.8232 |
0.9022 |
| AF-Q57484-F1-model_v4 | 1 | 395 | 1 | 397 | 0.8215 |
0.9031 |
| AF-P71399-F1-model_v4 | 1 | 393 | 1 | 396 | 0.8152 |
0.8981 |
| AF-D4GU68-F1-model_v4 | 1 | 457 | 1 | 472 | 0.8129 |
0.8452 |
| AF-P33699-F1-model_v4 | 1 | 457 | 6 | 486 | 0.8123 |
0.8612 |
| AF-Q48457-F1-model_v4 | 1 | 457 | 3 | 484 | 0.8074 |
0.8489 |
| AF-P37781-F1-model_v4 | 1 | 395 | 1 | 413 | 0.8072 |
0.9036 |
| AF-O32273-F1-model_v4 | 1 | 454 | 4 | 479 | 0.7973 |
0.8409 |
| AF-P77377-F1-model_v4 | 1 | 456 | 1 | 481 | 0.7961 |
0.8421 |