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Cluster: HRGMv2_2106_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2106_10 HRGMv2_2106_10_4 5317 12918 + CE8 | PL1
NULL(UNKNOWN) HRGMv2_2106_10 HRGMv2_2106_10_5 13254 15104 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2106_10 HRGMv2_2106_10_6 15448 16239 - 1.C.113.1.2
CAZyme HRGMv2_2106_10 HRGMv2_2106_10_7 17383 19863 + GT35
pfam HRGMv2_2106_10 HRGMv2_2106_10_8 20082 21038 + SpoIID
STP HRGMv2_2106_10 HRGMv2_2106_10_9 21242 22123 + Peptidase_M23
TC HRGMv2_2106_10 HRGMv2_2106_10_10 22410 23099 - 9.B.143.2.3
TC HRGMv2_2106_10 HRGMv2_2106_10_11 23241 24581 - 2.A.79.1.3
Gene ID: HRGMv2_2106_10_4
Type: CAZyme
Location: 5317 - 12918 (+)
Gene ID: HRGMv2_2106_10_5
Type:
Location: 13254 - 15104 (+)
Gene ID: HRGMv2_2106_10_6
Type: TC
Location: 15448 - 16239 (-)
Gene ID: HRGMv2_2106_10_7
Type: CAZyme
Location: 17383 - 19863 (+)
Gene ID: HRGMv2_2106_10_8
Type: pfam
Location: 20082 - 21038 (+)
Gene ID: HRGMv2_2106_10_9
Type: STP
Location: 21242 - 22123 (+)
Gene ID: HRGMv2_2106_10_10
Type: TC
Location: 22410 - 23099 (-)
Gene ID: HRGMv2_2106_10_11
Type: TC
Location: 23241 - 24581 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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